Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0122 ATCTTATATGTTAGTTTCATCTCTATGACTCTATGCATAACAGCTGCTCAAAACTGCACACGCTACAATTTGTCTTCTGCAAGTTTCTCTGTTACCACCCAAAACAATGTTCTTATCAGTAACAACAACTTCAGTGTGCAGAAAATTCCTGTTATGAAGGAATACTCTCTCAGTGTAACCTCAAATACCCTTGTCATCACCTTTACACCTTTCAATAATTCCATTGCTTTTGTGAACGCCATTGAAGTTGTTTCTATGCCTGATGACCTCATTTCTGATGATGCTGTCTCACTCGATCCATCGGCGCAATTCTCTGGGTTGGTGGTACAGGCACTGGAGACAGTTTTTAGAGTTAACATGGGGGGTCCAACTGTTTCATCTAGAAATGATACCCTTCAAAGAACTTGGGTTCCAGATCAAAGTTTCCTCGTGCAATCTAACTTTGCCTCTAGTTTTTCGAATATTGGTGCTGTTCAGTATGTAGATGGCGGGCCAACTGTGAACTCTGCTCCTCCTTCTGTTTATGGTACTCTCAATGAGATGAACTCGAGCAGCGATCCACGTAGTATTTTCAATGTGACATGGCAGTTTGATGTGGAGCCTGGATTTCAGTACCTTGTTCGACTTCACTTCTGTGATATAGTAAGTAAAGGTCTCAATGAACTCTACTTCGATGTCTATGTTGACTCATTTTTGGCTGCAAAGGATCTTGATCTCAGCATACTGGGTAACAATGTTTTGGGTGCTCCATATTATAAGGATTTGGTTACACCCTCCACTGCCAACAATAAACTTCGTGTAAGTATCGGCCCTTCTGGTCTTAATAGCAACTACAATAATGCTATTTTGAATGGGCTGGAGATCATGAAAATGAACAATTCTATGGGAAGTCTAAGTGCAGGAACAGCCGCTGCGGCTAATAATTCTGGCTCAAGTTCTAAGAATGTTGGTATGATAGTTGGTGTGGTTCTTGGGGCTCTAGGCGCAGTGGTCTTGGCTGGAGTTCTCTTTGTAATATGCAGGAAAAGAAGACGGTTGTCACAGGAGCAATCAAAAACATGGATTCCTTTATCCATCAACGATGGAATTACCTCTCATACCATGGGAAGCAAATATTCCAATGGAACAACAATAAGTGCTACTTCAAACTATGAATACCGTGTCCCCTTTTTGGCAGTTCAGGAGGCTACAAACAACTTTGATGAGAGTTGGGTTATCGGGGTAGGCGGTTTTGGAAAAGTATACAAGGGAGAATTAAGCGACGGCACTAAAGTGGCAGTGAAGAGGGGGAATCCACGGTCCCAGCAGGGTCTTGCAGAATTCCGAACTGAAATTGAAATGCTGTCTCAGTTCCGTCATCGCCATTTAGTGTCATTGATTGGGTATTGTGATGAAAAGAATGAAATGATCTTGATATATGAATATATGGAGAAGGGAACTCTCAAGGGTCATCTTTATGGTTTGGGTTTCCCAAGCTTAAGTTGGAAGGAGAGGCTTGAGATATGTATTGGATCCGCTAGAGGACTTCATTACCTTCACACCGGCTATGCTAAAGCAGTTATTCACCGTGACGTGAAGTCTGCAAATATTCTGCTTGATGAGAACCTTATGGCTAAAGTTGCTGATTTCGGATTGTCAAAGACAGGACCTGAAATTGATCAAACACACGTGAGCACAGCTGTTAAAGGGAGTTTCGGTTACCTTGATCCCGAGTATTTTAGGAGGCAACAACTAACAGAAAAGTCGGATGTGTATTCATTCGGTGTGGTTTTGTTTGAGGTTCTTTGTGCAAGGCCGGTCATAGATCCATCCCTTCCTAGGGAGATGGTAAACTTGGCGGAATGGGCAATGAAGTGGCATAAAAAAGGGCAATTGGAACAAATCATTGATCCAACACTTGCCGGCAAAATCAGACCAGACTCTCTTAGGAAGTTTGAAGAAACTGCTGAGAAATGCTTAGCTGACTATGGTGTTGATAGGCCTTCTATGGGAGATGTGTTATGGAATTTGGAGTATGCTCTCCAACTCCAAGAGGCAGTTGTTCAAGGTGATCCTGAAGAAAACAGTACCAATATGATTGGTGAACTCTCTCCACAAGTCAACAATTTTAATAACCATGATCCAAGTGCTTCTGGTGTAGTACAATTGGATGTACCTTCAACTGTGGATGATCTATCCGGTGTTTCTATGAGTAGGTCTGTAGTTTTCTGCCACAAACAGAACATTAAGGAACTTCTTAGATTTACAAAGCAAGACCAAGAAGGTTTGCGAGGAATGAATCAAGATACTGACAAGAACCCTTCAGCTCAGTGGAACCACATTGGTGGTGGAGATGAAGAGGAATATGAGAATTGTGTCAGTATCTATGATTCCTTAGTTCCTTCAAATCTTGCTCAGGCCTTCATAATTACCATCACTCACACTATGGGGGAGAACGGTGATCCACCTATCAATTATTTAAGAGGAAAGAGTTGGGAAACTCCAGATTCAAAAGTTTTGGGGTTGAAACAGTAA 2514 0.4196 ILYVSFISMTLCITAAQNCTRYNLSSASFSVTTQNNVLISNNNFSVQKIPVMKEYSLSVTSNTLVITFTPFNNSIAFVNAIEVVSMPDDLISDDAVSLDPSAQFSGLVVQALETVFRVNMGGPTVSSRNDTLQRTWVPDQSFLVQSNFASSFSNIGAVQYVDGGPTVNSAPPSVYGTLNEMNSSSDPRSIFNVTWQFDVEPGFQYLVRLHFCDIVSKGLNELYFDVYVDSFLAAKDLDLSILGNNVLGAPYYKDLVTPSTANNKLRVSIGPSGLNSNYNNAILNGLEIMKMNNSMGSLSAGTAAAANNSGSSSKNVGMIVGVVLGALGAVVLAGVLFVICRKRRRLSQEQSKTWIPLSINDGITSHTMGSKYSNGTTISATSNYEYRVPFLAVQEATNNFDESWVIGVGGFGKVYKGELSDGTKVAVKRGNPRSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMEKGTLKGHLYGLGFPSLSWKERLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPSLPREMVNLAEWAMKWHKKGQLEQIIDPTLAGKIRPDSLRKFEETAEKCLADYGVDRPSMGDVLWNLEYALQLQEAVVQGDPEENSTNMIGELSPQVNNFNNHDPSASGVVQLDVPSTVDDLSGVSMSRSVVFCHKQNIKELLRFTKQDQEGLRGMNQDTDKNPSAQWNHIGGGDEEEYENCVSIYDSLVPSNLAQAFIITITHTMGENGDPPINYLRGKSWETPDSKVLGLKQ 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0122 837 SUPERFAMILY Protein kinase-like (PK-like) 375 671 IPR011009 -
Lal8g0122 837 ProSitePatterns Serine/Threonine protein kinases active-site signature. 520 532 IPR008271 GO:0004672|GO:0006468
Lal8g0122 837 ProSiteProfiles Protein kinase domain profile. 400 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0122 837 SMART serkin_6 400 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0122 837 CDD STKc_IRAK 406 671 - -
Lal8g0122 837 Pfam Protein tyrosine and serine/threonine kinase 405 599 IPR001245 GO:0004672|GO:0006468
Lal8g0122 837 ProSitePatterns Protein kinases ATP-binding region signature. 406 428 IPR017441 GO:0005524
Lal8g0122 837 PANTHER RECEPTOR-LIKE PROTEIN KINASE HERK 1 22 710 - -
Lal8g0122 837 MobiDBLite consensus disorder prediction 758 777 - -
Lal8g0122 837 Gene3D - 110 293 - -
Lal8g0122 837 Gene3D Phosphorylase Kinase; domain 1 362 475 - -
Lal8g0122 837 Gene3D Transferase(Phosphotransferase) domain 1 476 693 - -
Lal8g0122 837 Pfam Malectin-like domain 29 291 IPR024788 -
Lal8g0122 837 PANTHER OS07G0166700 PROTEIN 22 710 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0122 Lal-Chr8 830166 834387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0122 22 732 Receptor kinase-like Gene Family AT3G46290 68.951 0.0 993
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lal8g0122 PK_Tyr_Ser-Thr 1.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0122 - - gmx:100806488 1114.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0122 8 830166 834387 Lal8g0122 8 830166 834387 ECH
Lal8g0122 8 830166 834387 Lal1g0350 1 2079456 2087108 PCT
Lal1g0350 1 2079456 2087108 Lal8g0122 8 830166 834387 PCT