Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0108 ACTTGTCATTCTACCTCCACTGCAAAGTTAGAGAATAATATTGCAATGGGAGTGCCTAATAACTCAAATGGGTCTACAACTGGTTCACGATGGAATCCTACAAAAGAACAAATAAGCATGTTGGAGAATCTGTATGAGCAGGGAATTAGGACACCAAGTGAGGAACAAATCAAGCAGATAACTACTAGGCTCAAGGCTTATGGTCACATTGAAGGAAAGAATGTCTTTTACTGGTTTCAAAATCACAAAGCTAGACAGAGGCAGAAGCAGAAGCAAGAGAGTATTGCATATTACAATCGCTATATTCATTCCCCTCAACCCAATATTTTCTCTTCCCCACATCACTGTCAAAATGTTATCTGCCAACCATATTGCCTGTCACAGAATGAAGTCAGCTTTTATTCTCAACACCCAAATCTGATTGGACCTGGATGCGTTAGCCCAAGGACTGAGAAATTTGTGCCTAATATGGGGATGTCAAGATTCAGTAATGACCAACAGATATATGAACAATTACAATTTCAACAGAGGAATCTGGGTTATTATAACGTTAGCAACAATAATAACCATGAAGAAACGTTGACGCTCTTTCCACTACACCCAACCGGCATTTTGGAATCAAAATCAAAAGAACACGTGTCTTCTCTACCTTCAACTTCTGCTGAACGTTACAGCCATACATCTGCTTCTGTTATTGGTGAAAATGCTCTCCGTGGAAACAAACCCTTCTTTGATTTCTTAACTTGTGGACTAGGCTCTCAAGAGAGTGAAGATAAGTGA 780 0.3962 TCHSTSTAKLENNIAMGVPNNSNGSTTGSRWNPTKEQISMLENLYEQGIRTPSEEQIKQITTRLKAYGHIEGKNVFYWFQNHKARQRQKQKQESIAYYNRYIHSPQPNIFSSPHHCQNVICQPYCLSQNEVSFYSQHPNLIGPGCVSPRTEKFVPNMGMSRFSNDQQIYEQLQFQQRNLGYYNVSNNNNHEETLTLFPLHPTGILESKSKEHVSSLPSTSAERYSHTSASVIGENALRGNKPFFDFLTCGLGSQESEDK 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0108 259 CDD homeodomain 30 90 IPR001356 GO:0003677
Lal8g0108 259 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 19 248 IPR044555 GO:0003700|GO:0099402
Lal8g0108 259 SUPERFAMILY Homeodomain-like 22 97 IPR009057 -
Lal8g0108 259 Gene3D - 30 97 - -
Lal8g0108 259 PANTHER TRANSCRIPTION FACTOR HOMOBOX-WOX FAMILY-RELATED 19 248 - -
Lal8g0108 259 Pfam Homeodomain 29 88 IPR001356 GO:0003677
Lal8g0108 259 ProSiteProfiles 'Homeobox' domain profile. 24 89 IPR001356 GO:0003677
Lal8g0108 259 SMART HOX_1 26 93 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0108 Lal-Chr8 765929 767346 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0108 24 250 Wox Gene Family AT5G59340 38.000 1.01e-47 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lal8g0108 Homeodomain 1.4e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0108 - - pvu:PHAVU_011G064900g 239.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0108 8 765929 767346 Lal8g0108 8 765929 767346 ECH