Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0100 ATGGATCCAAATTTGGTTGGAAACCGTGCTGATTTCTACAATTATGATCCAAATTATTGGGATCTTAATGGATTCAATTTCGCCAATTCTGAACCCTTTTATCAACATGATGATGCTGCTGAGCCACTTAGTTTTTCTCCGCACGCTTCAATCTTCAACTATGAAAGTGAAGCTGAAGCTGAAGCTGAAGCATCATTAGAACCGTATAATCTTCCATCAAATGATGCCCAGATTGCTGTGTTTAACTCTCTACCGGATCCATCCCTTGAAGACTCCGAATTTTCAGAAACTGCCAGGTACATAAGCCAAATTCTTATGGAGGAGAACTTTGAACAAAAGCCATGTATGTACTATGACCCAGTGAGTCTGCAAATCACTGAGAAATCATTCTCTGATGCCCTTATAGCAAAATTGCCTCATTCGCCTGATCAACACTCCCATGACAGTCATCAAAATCTGGAGAGTCCAGATGGGAATTGTTCTGGAAGCACTAGTACTGCTAATTCTAGCAGCAGTGGCACCAATAATGGTCATGAGTCGAAGCCTCCTTCACCAAATAGTCCTGTTTCTGATGATTATACTTTCCAGTTAAATTCAGATTTCACCTCTCAACTTCCTCAGCATGCTTTGACTAATATTAGTAATGGAATGTTGGATTTGGATTCTTCTGTAACCAAGCTCTTGGCTCAAAATATCTTCAGCAATGCAGACTCTATATTGCAGTTCAGAAGAGGATTAGAGGAAGCTAGTAAGTTTCTTCCTCAACAACCACAGATTTTCACTGGTGTAGATAGCAGCATGGCGTCTATAAATCCAAAGGGAGAAGGAGAGAAAGTGGCGGCATACAAGATAGAGAATGGTATTAGGGAGAATTGGAATGGGCTGAAGAATAGGAAGAATCATGAGCGCGAAGGCGAAGGACTTGAAGATGAAGAAGGAAGAAGCAACAAGCAATCTGCAATTAGTAGTGTTGAGGAGAGTGAATTATCTGAAATGTTCGACCAAGTGTTGCTTAGTATTGAAAATGTGCCGCTGCCTTGTGAACAGCAGCACGGATCAGTTGTCAATGGCAACAAACAGCCAAATGAGAAACCACATTCATCAAATGAAGGGAAGACTCGTTCCAAGAAACAAGGCAGGAAGAAGGAAACTGTGGATTTGAGGACTCTCTTGATTCTCTGTGCTCAAGCTGTGTCCGCCGGTGACAGCAGGACTGCTAATGAACTATTAAAGCAGATCAGGCAGCATTCTTCTCATTTAGGTGATGCTTCACAGAGGATGGCTCATTACTTTGCCAATGGCCTAGAGGCACGCTTGGTTGGTGCTGGAACTGGAACCCAAATATTTGTTAACTCTTGTAGCTACAAGAACAGTACTGCTGCTGATTTTATAAAAGCTTACAACCTTTTAATATCTGTTAGCCCTTTCAAGAAATTTGCACATTTCTTTGCTAACAAAATGATTATGAAAGCAGCTGAAAACGCAGAAACCCTACATATTATTGATTTCGGTATCCTGTATGGTTTCCAATGGCCAATACTTATCAAGTTTCTGTCAGAAAGAAGTGGTGGGCCTCCCAAACTACGCATCACAGGGATAGAGTATCCCCAACCCGGCTTTCGTCCATCAGAAAGACTTGAGGAAACAGGCCATCGTCTAGCTAACTATTGTAAGCGTTTCAATGTTCCCTTTGAGTTCAAAGCCGTAACATCACGAAATTGGGAAACCATTCAAATTGGCGATCTCAAAATCAGGAGCAATGAGGTACTTGCTGTGAACTGTCTGATAAGGTTTAGAAATTTACTCGACGACACAATTGAAGTAAATAGTCCTAGAAATGCAGTTCTGAATTTAATCAGGAAGATGAGTCCGGATATTTTTGTTCAATCCATAATAAATGGATCATACAATTCCCCATTCTTTGCCACACGCTTCAGAGAGGCACTGTTCCATTTTTCTGCAGTTTATGATATGTATGATATTCTTATATCCCGTAAAAATGAATGGAGATCGATGATTGAGAGAGAGATTCTGGGTAGGGAGATTATGAATGTTGTAGCCTGTGAAGGTTTTGAGAGGGTTGAGAGGCCTGAGACATACAAACAATGGCAGGTTAGGAATACAAGGGCTGGTTTTAAGCAGATCCCTCTTGATAAGGTGTTAATGACCAAATTTAAGGGGAAAATAAGGGAATGGTACCAACATGACAAAGATTTTGTCTTTGATGAAGACAACAACTGGATGCTTCAAGGCTGGAAGGGTCGTATCTTGTATGCATCCACTGCTTGGGTACCAGCATAA 2301 0.4111 MDPNLVGNRADFYNYDPNYWDLNGFNFANSEPFYQHDDAAEPLSFSPHASIFNYESEAEAEAEASLEPYNLPSNDAQIAVFNSLPDPSLEDSEFSETARYISQILMEENFEQKPCMYYDPVSLQITEKSFSDALIAKLPHSPDQHSHDSHQNLESPDGNCSGSTSTANSSSSGTNNGHESKPPSPNSPVSDDYTFQLNSDFTSQLPQHALTNISNGMLDLDSSVTKLLAQNIFSNADSILQFRRGLEEASKFLPQQPQIFTGVDSSMASINPKGEGEKVAAYKIENGIRENWNGLKNRKNHEREGEGLEDEEGRSNKQSAISSVEESELSEMFDQVLLSIENVPLPCEQQHGSVVNGNKQPNEKPHSSNEGKTRSKKQGRKKETVDLRTLLILCAQAVSAGDSRTANELLKQIRQHSSHLGDASQRMAHYFANGLEARLVGAGTGTQIFVNSCSYKNSTAADFIKAYNLLISVSPFKKFAHFFANKMIMKAAENAETLHIIDFGILYGFQWPILIKFLSERSGGPPKLRITGIEYPQPGFRPSERLEETGHRLANYCKRFNVPFEFKAVTSRNWETIQIGDLKIRSNEVLAVNCLIRFRNLLDDTIEVNSPRNAVLNLIRKMSPDIFVQSIINGSYNSPFFATRFREALFHFSAVYDMYDILISRKNEWRSMIEREILGREIMNVVACEGFERVERPETYKQWQVRNTRAGFKQIPLDKVLMTKFKGKIREWYQHDKDFVFDEDNNWMLQGWKGRILYASTAWVPA 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0100 766 MobiDBLite consensus disorder prediction 153 194 - -
Lal8g0100 766 MobiDBLite consensus disorder prediction 349 382 - -
Lal8g0100 766 MobiDBLite consensus disorder prediction 295 326 - -
Lal8g0100 766 Pfam GRAS domain family 387 763 IPR005202 -
Lal8g0100 766 PANTHER SCARECROW-LIKE PROTEIN 34 82 765 - -
Lal8g0100 766 MobiDBLite consensus disorder prediction 295 316 - -
Lal8g0100 766 MobiDBLite consensus disorder prediction 139 194 - -
Lal8g0100 766 MobiDBLite consensus disorder prediction 349 364 - -
Lal8g0100 766 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 82 765 IPR005202 -
Lal8g0100 766 MobiDBLite consensus disorder prediction 365 382 - -
Lal8g0100 766 ProSiteProfiles GRAS family profile. 378 764 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0100 Lal-Chr8 722464 725804 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0100 99 766 GRAS Transcription Factor Family AT1G07530 50.356 0.0 631
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lal8g0100 GRAS 4e-115 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0100 - - adu:107461599 922.154
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0100 8 722464 725804 Lal8g0100 8 722464 725804 ECH
Lal1g2182 1 23824969 23827209 Lal8g0100 8 722464 725804 ECH
Lal1g0317 1 1929106 1937800 Lal8g0100 8 722464 725804 PCT