Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0099 ATGTTTTCTACCAATTCCCTTTTGGAAAACTTTCCTGCTCAGTTGAAAGAATTCTTAGTTGAAGAAGATTCAACTTCCCCTTCTTCTGCCACAAGCTCAGTTGAAGAATACACAAAATATTCGAATCCTATACTAAGATACATAAATGACATTCTGATGGGTGAGGAAGATAACCTGGAGAGTAAACCCTGCATGTTGCAAGAATGTTTGAGACTCCAAGCTGCTGAAAAATCATTCTATGATGTGCTTGGACATACCTATCCCTCATCACACAACCAAATCCATGGCTTTTTCAATGATGATGATGATGTTAACAATGGTCGCTGTGTTAGTTTTGAGAGCAATAGTAGCTACAACACTGATAACTCATATGAGTCTGAAAGGATCAACACTGCTTATGAATTTGAATCTTATTTGCTTGATACCCCTTTAGTTGATACCTCACAAAAAACCAATGATGTCGATGTAGCTCCTGATCCATCTCAAGGTGCTAAGTGGAATGTGATTCAGTCACAGAACAAGGCAGTTTTGGTTGAAGAGAATGCTGTGCAAAGGGTAAAGAGAAGCCATAGGGTGGATGGTGATTCAAATGAAGAAGAAAATGAAAGAGGAAGCAAGGTTTCAGCAGTTTTTTCTGACAATTTAGAGCCACCAGAGCTCTTGGATGAGGTGCTGCGTGCTCAGATTGGAAAAAGTCATTCTTGTGTTGCAGGTGAAACATCATCACACAATGACAAGTTGAAGCTGAATGTTGTTGATTCAGGAGGGGGATCGATTGGCAAGGCGACACGTTCGAAGAAAGGGACTAATACCGAGACAGCGGTAGATTTATGGACACTGCTAACTCAATGTGCACAAGCTGTTGCAAGCTATGATCAAAGAAATGCAAATGAGCTACTAAATCAGATTAGGCAACACTCTTCTCCTTTTGGTGATGGTCTTCAGCGTTTATCTCATTACTTTGCCATTGGCCTTGAGACACGCTTGGCTGCTGGAACACCCTCATATACTCCCTTTGATATGGTAACTGCTGCAGATATGTTGAAAGCTTATAAGCTACAAGTACAAGTGTTTCCTTTACAGAGAGTGTCAAATTTATTGACAACAAAAACAATTGTGGACCAAGTGAAAAATGAAGGCAGCCTTCACATTATTGACTTTGGCATTTCCTATGGTTTCCAGTGGCCTTGCCTTATCAAATATCTGTCACAAAGACGCGGCGGACCGCCGAAGGTCCGTATGACAGGAATTGATCTTCCTCAGCCAGGATTTCGCCCCGCTGAGAGGCTTCAGGAGACGGGGCAGCGCCTTGAAAATTACTGCAAGAGGCACAATGTTCCATTTGAATACAATTGCCTAGCACAAAAATGGGAAACCATAAAACTTGAAGATCTCAAAATAGATAAGACTGAGGTAACTGTTGTTAACTGTTTGTACCGGTTGAAGAACCTGCCTGATGAAACCGTTTCGGTTAACTCTGCAAGAGATGCTTTGTTGAAGTTATTCAGGAAGATTAATCCAAACATCTTTCTCCATGGGGTAGTGAATGGAACATATAGTGCACCATTTTTCCTCACAAGGTTCAGGGAGACACTCTTCCACTTCTCATCACTGTTTGATATCTTTGAGGCTAATGTGGATCGCGAAGATACCGAGAGGGTGATCCTCGAGAAAGGGTTGTTTGGAAGGGATGCTATCAATGTCATAGCTTGTGAGGGTCCAGAAAGGGTTGAAAGGCCAGAAACATATAAGCAATGGCAGGTTAGGAACCTCAGAGCTGGGTTCAAGCAACTTAGATTGAATCCAGAATTGGTGATTGAAGCTAAAGAAATGGTGAAGACTGAATATCATAAAGATTTTGTAGTGGATGAGAATGGCAAGTGGGTTTTTCTGGGATGGAAAGGGCGTATACTCAATGCTATTTCTGCTTGGATTCCTGCTTAA 1944 0.4162 MFSTNSLLENFPAQLKEFLVEEDSTSPSSATSSVEEYTKYSNPILRYINDILMGEEDNLESKPCMLQECLRLQAAEKSFYDVLGHTYPSSHNQIHGFFNDDDDVNNGRCVSFESNSSYNTDNSYESERINTAYEFESYLLDTPLVDTSQKTNDVDVAPDPSQGAKWNVIQSQNKAVLVEENAVQRVKRSHRVDGDSNEEENERGSKVSAVFSDNLEPPELLDEVLRAQIGKSHSCVAGETSSHNDKLKLNVVDSGGGSIGKATRSKKGTNTETAVDLWTLLTQCAQAVASYDQRNANELLNQIRQHSSPFGDGLQRLSHYFAIGLETRLAAGTPSYTPFDMVTAADMLKAYKLQVQVFPLQRVSNLLTTKTIVDQVKNEGSLHIIDFGISYGFQWPCLIKYLSQRRGGPPKVRMTGIDLPQPGFRPAERLQETGQRLENYCKRHNVPFEYNCLAQKWETIKLEDLKIDKTEVTVVNCLYRLKNLPDETVSVNSARDALLKLFRKINPNIFLHGVVNGTYSAPFFLTRFRETLFHFSSLFDIFEANVDREDTERVILEKGLFGRDAINVIACEGPERVERPETYKQWQVRNLRAGFKQLRLNPELVIEAKEMVKTEYHKDFVVDENGKWVFLGWKGRILNAISAWIPA 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0099 647 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 15 646 IPR005202 -
Lal8g0099 647 ProSiteProfiles GRAS family profile. 268 645 IPR005202 -
Lal8g0099 647 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 15 646 - -
Lal8g0099 647 MobiDBLite consensus disorder prediction 187 206 - -
Lal8g0099 647 Pfam GRAS domain family 279 644 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0099 Lal-Chr8 718746 720689 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0099 40 646 GRAS Transcription Factor Family AT2G29060 43.660 1.20e-162 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lal8g0099 GRAS 5e-107 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0099 - - aprc:113855970 878.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0099 8 718746 720689 Lal8g0099 8 718746 720689 ECH
Lal25g0138 25 862262 866729 Lal8g0099 8 718746 720689 LSH
Lal8g0099 8 718746 720689 Lal1g0317 1 1929106 1937800 PCT