Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0095 ATGAATGAAATGGGACACATTGAATATCAAATCAATCCCACCAATCCACCACTCTCTGTCTTCAATGCTGCAAGCAATCTTATTTGGACAACCTTAGAAGCAAAACATCAAATAAGGAGCATTTTGGTACTTCAGCTCAAAATGGATAAGAGCTGGATTCTGAATTTTCTGCTCCTCATCCTCCATTTACGTACAACACAAGCTTCATTTGGTGTTGGTGGTGGTGTAGGTGTAGGTGTAGGTGTTACCAATGGTGGTGGTGGTGGAAGTGGTGGAGTTTTTTGGGTTGGTGGAGAGGTTAACAGCCCAGAGCCACCTAGATCTTCAGTGCCAAAGCTGGATGGAGCTTACACAGCTCTTCAGGCTTGGAAATCTGCAATCACCAATGACCCTCTAAAGATTTTAGATAGTTGGGTTGGTCCTAATGTGTGTTCTTACAAAGGAGTCTTTTGTTCAAATCTTGAAATGGCTTCATCAACTGTACTTGTTGTTGCAGGCATAGATCTCAACCATGCAAATCTCCGAGGAACACTTGTCAAAGAGCTCTCTTTACTCACTGATATGTCTCTTCTCCACCTCAACAGTAACAGATTCACTGGCACAGTTCCTGATACATTCAAAGACCTCACATCATTGGAAGAGTTAGACCTCAGCAACAACCAACTTTCAGGTCATTTTCCTTCTGTCACTTTATACATGCCAAGCCTCATCTACTTGGACATCAGATTCAACTCCTTCTCAGGATCCCTCCCACAAGAACTTTTCAATAAGAATCTTGATGCAATCTTTGTTAACAACAATCAATTTGAAGGTGAAATTCCTCAAAACTTGGGTAATTCTCCTGCCTCAGTGATAAATTTAGCCAACAACAAGCTTAGTGGAAACATTCCAGCAAGTTTTGGCTTCATTGGTTCTAAAGTAAAAGAGATTCTCTTCCTTAATAACCAATTAACAGGTTGCATTCCTGAAGGAGTAGGACTATTCACAGAGATGCAAGTTCTAGATGTAAGCTTCAATTCACTTATGGGTCATGTGCCAGACACACTATCTTGCCTTCAAAATATAGAAGTCCTTAATTTGGCACATAACAAACTTTCTGGAGAGTTATCAGAAGTACTATGCTCTCTGAGAAGCCTTGCAAATCTAACAGTTGCATACAATTTCTTCTCTGGGTTCAGTCAGCAATGCTCAAAGCTTTTCTTTAGGAATATTGGTTTTGATTTTTCACTTAACTGCATTCCTGGAAGGGACATGCAGAGACCTCAACCTGAATGCTCTGTGATACCAGGTGGTAGCCTAAGTTGTATCAGAATCCCAACACCAAAGCCTCTTGTTTGTGGTTCCTTGGTTGTAAGTACCACTAACAACACTGATCACAGTTCATCATCACCATCTCCTTAA 1401 0.4083 MNEMGHIEYQINPTNPPLSVFNAASNLIWTTLEAKHQIRSILVLQLKMDKSWILNFLLLILHLRTTQASFGVGGGVGVGVGVTNGGGGGSGGVFWVGGEVNSPEPPRSSVPKLDGAYTALQAWKSAITNDPLKILDSWVGPNVCSYKGVFCSNLEMASSTVLVVAGIDLNHANLRGTLVKELSLLTDMSLLHLNSNRFTGTVPDTFKDLTSLEELDLSNNQLSGHFPSVTLYMPSLIYLDIRFNSFSGSLPQELFNKNLDAIFVNNNQFEGEIPQNLGNSPASVINLANNKLSGNIPASFGFIGSKVKEILFLNNQLTGCIPEGVGLFTEMQVLDVSFNSLMGHVPDTLSCLQNIEVLNLAHNKLSGELSEVLCSLRSLANLTVAYNFFSGFSQQCSKLFFRNIGFDFSLNCIPGRDMQRPQPECSVIPGGSLSCIRIPTPKPLVCGSLVVSTTNNTDHSSSSPSP 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0095 466 ProSiteProfiles Leucine-rich repeat profile. 211 233 IPR001611 GO:0005515
Lal8g0095 466 SUPERFAMILY L domain-like 117 398 - -
Lal8g0095 466 Pfam Leucine rich repeat 190 245 IPR001611 GO:0005515
Lal8g0095 466 PRINTS Leucine-rich repeat signature 212 225 - -
Lal8g0095 466 PRINTS Leucine-rich repeat signature 352 365 - -
Lal8g0095 466 SMART LRR_typ_2 185 208 IPR003591 -
Lal8g0095 466 SMART LRR_typ_2 352 376 IPR003591 -
Lal8g0095 466 SMART LRR_typ_2 209 233 IPR003591 -
Lal8g0095 466 Gene3D Ribonuclease Inhibitor 282 403 IPR032675 -
Lal8g0095 466 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 47 464 - -
Lal8g0095 466 Pfam Leucine rich repeat N-terminal domain 117 152 IPR013210 -
Lal8g0095 466 Gene3D Ribonuclease Inhibitor 116 281 IPR032675 -
Lal8g0095 466 PANTHER LRR/EXTENSIN 47 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0095 Lal-Chr8 704572 705972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0095 106 435 Leucine-rich Repeat extension Gene Families AT3G22800 50.151 1.50e-107 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0095 - - gsj:114407518 652.899