Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0082 ATGGGGAGGAAATGTTCACATTGTGGAAACATTGGTCATAATTCTAGGACTTGCACTTCTTTTAGAGGGACATTTGTAGGACTACGCCTCTTTGGTGTTCAACTAGACATATCTTCTTCTTCTTCTTCTTCTTCATCCTGTATCAAGAAAAGCTTTAGCATGGATTCCTTCTTGCCCATATCATCATCTTCTACCTCCTTTGCTTCATCAAGAATAACTATTGACCAAAACACTGACAGAACCTCTATTGGGTATCTATCAGATGGTCTCATAGTTCGACCACAAGAGAGGAAGAAAGGAATTCCATGGACAGAAGAAGAGCACCGAACCTTCCTTGTTGGACTTGAGAAGCTAGGTAAAGGTGACTGGAGGGGTATTTCAAGAAACTATGTGACAACAAGAACCCCAACCCAAGTTGCTAGCCATGCTCAAAAGTATTTCCTTCGAATTGCAACCATTAATAAGAAGAAGCGACGTTCCAGTCTCTTTGACTTGGTGGGAAGCAGCAAGACAAACAAAGCAGGTCCTATTAGCTTCACCAATAATAGCAAGTTGGGTAACTCAATTTGTAGTAATGAACATGTTAAATCCAAATGTGGAGTAGTTGTAAATGATGCCACTTTGTCTCTACTAGGGAGCCTTACATCTTTTCAACAACAAACCAAATCAGATGAACAAAAAACAAGTGATAATTACTCTCAATTTCAAGCAGAACATAATGAAGCTGTGCAAATTAGGCTTATGAAATCTTCAAATGTGACTCTGGCAATTGCAACACCTGATCTGGAGCTCACTCTTGCAGCCCCAAAGGCTAAGACCATAGAACAGAATAAATCATCTCCGGTTTCCATCCTTCCTGGGCCAATTAGTGTGACTTAA 879 0.4027 MGRKCSHCGNIGHNSRTCTSFRGTFVGLRLFGVQLDISSSSSSSSSCIKKSFSMDSFLPISSSSTSFASSRITIDQNTDRTSIGYLSDGLIVRPQERKKGIPWTEEEHRTFLVGLEKLGKGDWRGISRNYVTTRTPTQVASHAQKYFLRIATINKKKRRSSLFDLVGSSKTNKAGPISFTNNSKLGNSICSNEHVKSKCGVVVNDATLSLLGSLTSFQQQTKSDEQKTSDNYSQFQAEHNEAVQIRLMKSSNVTLAIATPDLELTLAAPKAKTIEQNKSSPVSILPGPISVT 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0082 292 PANTHER TRANSCRIPTION FACTOR KUA1 1 289 - -
Lal8g0082 292 ProSiteProfiles SANT domain profile. 103 151 IPR017884 -
Lal8g0082 292 CDD SANT 102 147 IPR001005 -
Lal8g0082 292 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 95 151 IPR017930 -
Lal8g0082 292 ProSiteProfiles Myb-like domain profile. 95 147 IPR001005 -
Lal8g0082 292 Pfam Myb-like DNA-binding domain 102 147 IPR001005 -
Lal8g0082 292 SMART sant 99 149 IPR001005 -
Lal8g0082 292 Gene3D - 101 154 - -
Lal8g0082 292 SUPERFAMILY Homeodomain-like 96 151 IPR009057 -
Lal8g0082 292 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 98 149 IPR006447 GO:0003677
Lal8g0082 292 PANTHER TRANSCRIPTION FACTOR MYB1R1-LIKE ISOFORM X1 1 289 - -
Lal8g0082 292 ProSiteProfiles Zinc finger CCHC-type profile. 3 20 IPR001878 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0082 Lal-Chr8 616051 618249 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lal8g0082 Myb_DNA-binding 3.9e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0082 - - gmx:778052 328.561