Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0078 ATGGCCAATTCTCGCCAAAACATAAGGAAGTTGGTTAAGGATGGCTTCATTATCAGGAAGCCTACTAAGATGAAGGGTAATGTGTTCGAGAGCATTCACAAGTCCAAGGCTGAGAAGGCAAGAGAGAAGACTTTGTCTGATCAGTTTGAAGCTAAGCGTGCAAAGAACAAGGCAAGCAGGGAAAGGAAACATGCACGGAGAGAAGCCCTTTTTTTAGAATTTATTTATGCCATTTCCTGTTTTTAA 246 0.4146 MANSRQNIRKLVKDGFIIRKPTKMKGNVFESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREALFLEFIYAISCF 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0078 81 MobiDBLite consensus disorder prediction 39 62 - -
Lal8g0078 81 PANTHER RIBOSOMAL PROTEIN L19 28 69 - -
Lal8g0078 81 PANTHER RIBOSOMAL PROTEIN L19 1 25 - -
Lal8g0078 81 Gene3D - 1 74 - -
Lal8g0078 81 PANTHER 60S RIBOSOMAL PROTEIN L19 28 69 IPR039547 GO:0003723|GO:0003735|GO:0022625
Lal8g0078 81 PANTHER 60S RIBOSOMAL PROTEIN L19 1 25 IPR039547 GO:0003723|GO:0003735|GO:0022625
Lal8g0078 81 MobiDBLite consensus disorder prediction 39 56 - -
Lal8g0078 81 SUPERFAMILY Ribosomal protein L19 (L19e) 2 42 IPR035970 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0078 Lal-Chr8 589791 592032 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0078 23 68 Cytoplasmic Ribosomal Protein Gene Family AT4G02230 84.906 1.93e-21 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0078 K02885 - ming:122085408 85.8853