Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0073 ATGGCTGGTACTCATGATACTAGTCTTACTACTAGTATTATTACTAGTTCGATGCACAACCCGTCTTGTAATAATGACTTAGCAGCTTGTTCCAACAATATAAGTAAGTTGTATAGAGGGGTGAGGAAGAGAAAATGGGGTAAATGGGTATCTGAGATTAGGCTTCCAAATAGTCGTGAGCGTATATGGTTGGGTTCTTATGATACTCAAGTCAAGGCTGCTAGGGCCTTTGATGCAGCACTTTACATTCTACGTGGTACCAATGCATGTTTCAATTTCCCTGACACCCCTCTCAACATGAACATAAACAATGTGGTTGTTCCTCGTGGCCGATCTCTTTCCCCACAAGAAATTCAACAGGTTGCTTCTAAGTTTGCCAATTGTACACATACCCCACTTGAAACTCAAGAAGAAGAAGAAATAGTAGTAGTAGAAGAAGAAGAACCATCAGAGTCACAAAGCGGTATTGACTCATGTGGATTATTTGAATCCAAAACTACATCTTCTGGGTATGATAACTATGATGGGAAGATGGATTGGACATTTTTGAACAAGTTGGATGATGACTCTAATGCAGTTGTGGGCTTCGATTGCAGACCCCATTATTTTGAACTAGACAAGATGTATTCACCAGGTGAGTTATTATATAACACACAACCACCAGAACTTGAGGATAATGGGGATGAAATTGAAGGTGGTGATGCTTTTTCTAACCATTCAATCCTTTGGAGTTGGGACTTTTGA 744 0.3992 MAGTHDTSLTTSIITSSMHNPSCNNDLAACSNNISKLYRGVRKRKWGKWVSEIRLPNSRERIWLGSYDTQVKAARAFDAALYILRGTNACFNFPDTPLNMNINNVVVPRGRSLSPQEIQQVASKFANCTHTPLETQEEEEIVVVEEEEPSESQSGIDSCGLFESKTTSSGYDNYDGKMDWTFLNKLDDDSNAVVGFDCRPHYFELDKMYSPGELLYNTQPPELEDNGDEIEGGDAFSNHSILWSWDF 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0073 247 PRINTS Ethylene responsive element binding protein signature 38 49 IPR001471 GO:0003700|GO:0006355
Lal8g0073 247 PRINTS Ethylene responsive element binding protein signature 60 76 IPR001471 GO:0003700|GO:0006355
Lal8g0073 247 SUPERFAMILY DNA-binding domain 37 95 IPR016177 GO:0003677
Lal8g0073 247 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 27 247 - -
Lal8g0073 247 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF018 27 247 - -
Lal8g0073 247 CDD AP2 36 96 IPR001471 GO:0003700|GO:0006355
Lal8g0073 247 ProSiteProfiles AP2/ERF domain profile. 37 94 IPR001471 GO:0003700|GO:0006355
Lal8g0073 247 SMART rav1_2 37 100 IPR001471 GO:0003700|GO:0006355
Lal8g0073 247 Pfam AP2 domain 38 84 IPR001471 GO:0003700|GO:0006355
Lal8g0073 247 Gene3D AP2/ERF domain 37 95 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0073 Lal-Chr8 541801 542544 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0073 27 130 AP2-EREBP Transcription Factor Family AT1G19210 62.500 7.40e-40 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lal8g0073 AP2 4.8e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0073 - - lang:109358241 397.512