Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0069 ATGCCTTCCATTGGGCTACTCATCACATTGAGAATTCTATCATCATTGCCGTTCATGTCAAGCACAAAAACATTCCTCATCGTAGAGGGGACGAATGTTTGTCGACCTGACGAAGACGATGAAGCTAATGTTTTCAGTCAGATACGTCCATTGTGTAATCCTAATGTCGTTAAATTGAAAGAAGCCGTAGTTGATGATAGTGACATTACAAGAGGAATTTTAGAATTTGCACAGAGGAATCACATCCATAGTATAGTGGTTGGTGCACCCTCAACCAAGAACAAGAACGCTTTGACAGGTGTTGGAAAACTAACAGCAAGATCTTTCACCATAAGGACTGGAACCAAAAAACATAAAGAACACCACAATCCTCAAAAGGTGGCAGAGGCCATAATCAAGGAAGCCCCAGATCATATTTCAGTATATGTAATTTCAAAAAGGAAGTTAGTGGCAGTTCGACCAGCAACAAGCCCATTGGTAAACGTGGTTGCACCGCCAAAACAACCACCTGTGCAGCCACTTCAACCTAATGATTATGAGTCCGAAAATGGAGTAAGCTACAATTCAAACATGACACAAACACCAAGAGTAAGGAGCACTAGAGAAAGAGCAGAGAGAAAAAATGCGCGTGAGAGATCAAGGATTTCAACAAGCACTCAATCAATGGGCAGCTTTGATCTAACCATTAATAGAGGACAAAGGTTATCATCAACCTCAGATGAAAATAACTCTTCAGGGTCACTTAAGTATGGATCAATGGATGTGACTAACTCTTCAGGGTCACTTAAGTATGGATCAACGGATGTGACTAAGCACAATATGGATTTAAGCATTGCATCAGATTCTCAACCATCAGGAGATGTAGAAGTTGAAATGAAAAAATTGAGGCTCAAACTGAAGCAAACTATGGATATGTACAGCTCAGCTTGCAAAGATGCAATCTCAGCCCAAAATAAGGCTGAAGAGATTAACAATTGGAAAATGGAGAGGAGACAAAGGTTTAAAGATGTAAGGTTGTCTGAAGAGACAGCTCTTGCAATGGCAGAAAAGGAGAAGGCTAAAGTCAAAGATGCATTGGAAGCAGCTGAGAAAGCCATGAAGATGGCTGAAAAGGAAGCACATAGAAGATTGCAGGCAGAAAAGATGGCAAAGAGGGAGGCAAAAGAGAAGGACTGGGCATTAACCGCGTTAGCTAGCAAAGATTTTCGATGCAGAGAATACACAATAGAGGATATTGAAAAAGCTACTGAAAAGTTCTCCCCATCATTGAAAATAGGTGAAGGTGGATATGGACCTGTGTTTAAAGGCCAACTTGATCACACTCCAGTTGCAATCAAACTTTTAAACCCTGAGGCTTCACAAGGCAGGAAGCAGTTCCAACAAGAGGTTGAGGTATTAAGCACCATTAGGCATCCTAACATGGTCCTCCTCCTTGGTGCCTGTCCTGAGTATGGATGCTTGGTGTATGAATACATGAATAATGGTAGCTTAGAGGATAGATTATTGATGAAAAACAACAGCCCTCCTATTCCATGGCCGAAACGTTTCGAAATTGCTTCTGAGATTGCAACTGCTCTCCTTTTCCTTCACCAAACAAAGCCAGAACCCCTTGTTCATAGAGACCTTAAACCAGCCAACATTCTTTTGGACAGAAATTTTGTGAGTAAAATAGGTGATGTTGGTCTTGCAAGACTAGTCCCTCCTTCTGTCGCAGATTCTGTCACACAATATCACATGACCACAGCTGCTGGAACCTTTTGCTACATTGATCCCGAGTATCAACAAACAGGAAAGTTAACAACAAAGTCAGATATTTATTCCTTGGGAATAGTGTTGCTGCAGATAATCACAGCCAAACCTCCAATGGGGATTGCTCACCATGTTAATAGGGCAATTGATAATGGAAGTTTTTCTGATATGCTTGATCCTGTGGTGACTGATTGGCCAGTTGAAGAGGCTCTAGCATTTGCTAAATTGGCATTGAAATGTGCAGAACTTAGCAAGAAGGATAGGCCAAATCTTGCATTGGTAGTGGTACCAGAGCTCAACCGTTTAAGAGACTTTGGGTATACATCACAGACTAATCAGATTAAGAATCGTAGCCATTCGCCACGCCCCCCTACACCAAGAAGAAATCCACACTCAATAACATGA 2154 0.4155 MPSIGLLITLRILSSLPFMSSTKTFLIVEGTNVCRPDEDDEANVFSQIRPLCNPNVVKLKEAVVDDSDITRGILEFAQRNHIHSIVVGAPSTKNKNALTGVGKLTARSFTIRTGTKKHKEHHNPQKVAEAIIKEAPDHISVYVISKRKLVAVRPATSPLVNVVAPPKQPPVQPLQPNDYESENGVSYNSNMTQTPRVRSTRERAERKNARERSRISTSTQSMGSFDLTINRGQRLSSTSDENNSSGSLKYGSMDVTNSSGSLKYGSTDVTKHNMDLSIASDSQPSGDVEVEMKKLRLKLKQTMDMYSSACKDAISAQNKAEEINNWKMERRQRFKDVRLSEETALAMAEKEKAKVKDALEAAEKAMKMAEKEAHRRLQAEKMAKREAKEKDWALTALASKDFRCREYTIEDIEKATEKFSPSLKIGEGGYGPVFKGQLDHTPVAIKLLNPEASQGRKQFQQEVEVLSTIRHPNMVLLLGACPEYGCLVYEYMNNGSLEDRLLMKNNSPPIPWPKRFEIASEIATALLFLHQTKPEPLVHRDLKPANILLDRNFVSKIGDVGLARLVPPSVADSVTQYHMTTAAGTFCYIDPEYQQTGKLTTKSDIYSLGIVLLQIITAKPPMGIAHHVNRAIDNGSFSDMLDPVVTDWPVEEALAFAKLALKCAELSKKDRPNLALVVVPELNRLRDFGYTSQTNQIKNRSHSPRPPTPRRNPHSIT 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0069 717 SMART serkin_6 419 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0069 717 ProSitePatterns Serine/Threonine protein kinases active-site signature. 537 549 IPR008271 GO:0004672|GO:0006468
Lal8g0069 717 MobiDBLite consensus disorder prediction 174 197 - -
Lal8g0069 717 Coils Coil 345 390 - -
Lal8g0069 717 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 29 715 - -
Lal8g0069 717 MobiDBLite consensus disorder prediction 214 252 - -
Lal8g0069 717 PANTHER OS02G0152300 PROTEIN 29 715 - -
Lal8g0069 717 MobiDBLite consensus disorder prediction 198 213 - -
Lal8g0069 717 SUPERFAMILY Protein kinase-like (PK-like) 402 677 IPR011009 -
Lal8g0069 717 ProSiteProfiles Protein kinase domain profile. 419 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0069 717 Gene3D Transferase(Phosphotransferase) domain 1 492 703 - -
Lal8g0069 717 MobiDBLite consensus disorder prediction 690 717 - -
Lal8g0069 717 Pfam Protein tyrosine and serine/threonine kinase 424 675 IPR001245 GO:0004672|GO:0006468
Lal8g0069 717 CDD STKc_IRAK 425 685 - -
Lal8g0069 717 MobiDBLite consensus disorder prediction 163 252 - -
Lal8g0069 717 Gene3D Phosphorylase Kinase; domain 1 393 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0069 Lal-Chr8 522950 527564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0069 59 689 Receptor kinase-like Gene Family AT5G12000 55.850 0.0 677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lal8g0069 PK_Tyr_Ser-Thr 8.4e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0069 - - gmx:100786386 756.133