Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0068 ATGTCGACGGTGTACGTTCTAGAACCGCCGACGAAGGGGAAGGTGGTTTTGAACACAACGCGGGGTCCAATTGACATTGAGTTGTGGCCAAAGGAGGCTCCTAAAGCAGTTAGAAATTTCATTCAGCTTTGCCTTGAACGCTATTATGACAATTCCATCTTCCATCGTATCATCAAAGATTTCCTCGTTCAGTCTGGTGATCCTACTTCCACCGGCACTGGAGGTGAAAGTATTTATGGGGGCGTTTTTGCTGATGAGTTTCATTCACGTCTAAAATTCAAGCACAGAGGTATAGTTGCAATGGCCAATGCTGGCTCCCCTAATTCCAATGGAAGTCAGTTTTTCATTACTCTTGACCGTTGTGACTGGCTTGATCGGAAGCATACCATTTTCGGAAAGGTCACAGGAGATACAATGTATAATCTTTTGAGAGTGGGAGAAGTTGAAACTGATAAGAATGACCGGCCTTTAGATCCTGCCCCAAAGATATTATCAGTTGAGGTATTATGGAACCCATTTGAAGATATTGTTCCAAGAACACTTCAGAAGCCTGGAATTAGAGCTACACCTGATACGGACAATAAAGATTCAAAGAAGAAAGGCATAAAAAAATTGAACTTGCTTTCATTTGGAGAAGAAGCTGAAGTTGAGGAAAAGGAATTAGCACTGGTGAAGCAAAAGATTAAGAGCAGCCACGATGTCTTGAACGATCCTCGTCTTCTAAGGGAAGAAACTCCTAATAATGAATTGAGTCCATCAGCTAGTAAATTAACAAGGAACATGCAGTTATCTGTAAGGGATGCGCTAAACTCAAAGAAGGAAGAGTCTCAAAAAGATTCAGAAGCTGGTAATTTGGCCCGTCTCGATTCCGGCGATGATGAAGATGAAGAAGCAGATTTTGATTCAAGAATGCGTTTACAAATACTCCAAAAGCGGAAGGAGCTCGGTGATCTTCCTCCCAAGTCAAAGTCACAAAGTGGAAGGTCAAATCCGAAGGACCATGATATGTCGGCAGCTAGGTCAAATGCTAGTATTGATGAAGATCAACCAAGGGTGGATAAGTTGTCCTTAAGGAAAAAGGGAATAGGATCTGAAGCAAGAGCCGAACGAATGGCTAATACAGATGTAGATTTACAACTATTGAGTGAAGCTGAGAAAGGAAGGCAGTTGCAGAAGCAGAAGAAACGCAGACTTCAGGGGCGTGAAGATGAAGTTCTTGCTAAACTTGAGAAATTTAAGAATGCTTTATCAGCGAAGACGACATCAACAACTGGTGAATCTGGAGATGGCAAGGAGGAGGAGTTATCTGACTGGAAAGTTGTTGACTTAAAATTTGCCCCCCAGGATGGAAAGGACCGCATGTCTCGAAATGAAGACCCGAATGACTATGTGGTGCATGACCCTCTTTTGGAGAAAGGGAAAGAGAAATTCAATAAGATGCAGGCGAAACAAAAGAGACGAGAGCGAGAGTGGGCTGGGAGATCCCTTACTTGA 1494 0.429 MSTVYVLEPPTKGKVVLNTTRGPIDIELWPKEAPKAVRNFIQLCLERYYDNSIFHRIIKDFLVQSGDPTSTGTGGESIYGGVFADEFHSRLKFKHRGIVAMANAGSPNSNGSQFFITLDRCDWLDRKHTIFGKVTGDTMYNLLRVGEVETDKNDRPLDPAPKILSVEVLWNPFEDIVPRTLQKPGIRATPDTDNKDSKKKGIKKLNLLSFGEEAEVEEKELALVKQKIKSSHDVLNDPRLLREETPNNELSPSASKLTRNMQLSVRDALNSKKEESQKDSEAGNLARLDSGDDEDEEADFDSRMRLQILQKRKELGDLPPKSKSQSGRSNPKDHDMSAARSNASIDEDQPRVDKLSLRKKGIGSEARAERMANTDVDLQLLSEAEKGRQLQKQKKRRLQGREDEVLAKLEKFKNALSAKTTSTTGESGDGKEEELSDWKVVDLKFAPQDGKDRMSRNEDPNDYVVHDPLLEKGKEKFNKMQAKQKRREREWAGRSLT 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0068 497 MobiDBLite consensus disorder prediction 311 402 - -
Lal8g0068 497 CDD cyclophilin_CeCYP16-like 8 180 - -
Lal8g0068 497 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 5 202 IPR044666 -
Lal8g0068 497 MobiDBLite consensus disorder prediction 246 267 - -
Lal8g0068 497 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 22 159 IPR002130 GO:0000413|GO:0003755
Lal8g0068 497 MobiDBLite consensus disorder prediction 417 497 - -
Lal8g0068 497 MobiDBLite consensus disorder prediction 426 497 - -
Lal8g0068 497 MobiDBLite consensus disorder prediction 237 299 - -
Lal8g0068 497 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 28 43 IPR002130 GO:0000413|GO:0003755
Lal8g0068 497 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 54 66 IPR002130 GO:0000413|GO:0003755
Lal8g0068 497 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 98 113 IPR002130 GO:0000413|GO:0003755
Lal8g0068 497 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 125 IPR002130 GO:0000413|GO:0003755
Lal8g0068 497 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 126 141 IPR002130 GO:0000413|GO:0003755
Lal8g0068 497 PANTHER SPLICEOSOME-ASSOCIATED PROTEIN CWC27 HOMOLOG 5 202 - -
Lal8g0068 497 SUPERFAMILY Cyclophilin-like 14 181 IPR029000 -
Lal8g0068 497 Gene3D - 2 183 IPR029000 -
Lal8g0068 497 MobiDBLite consensus disorder prediction 268 289 - -
Lal8g0068 497 MobiDBLite consensus disorder prediction 327 372 - -
Lal8g0068 497 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 15 168 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0068 Lal-Chr8 516583 521983 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0068 9 173 U-box Gene Family AT5G67530 46.667 6.96e-40 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0068 K12737 - gmx:100793148 786.178