Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0066 ATGAGTGATAAAAATGAAAGAGCAGCAGATTTTTCACTTGACAGTGATTTCACCAACCATTTGTCTGCTGAGCTATCTGAGTACTTAAAGTTTGATGATATTAATGAATGGCTAGTTGATGATGATCTACAATCATTTATTTCAAGCCAGGAACATCAAGCTAATGTTGTTAGTCATTTTGGAGAAGGTGCTTGTCACTATGAGGGGTCTTCTACCAGAGGAAATAGCAGCGGATACCAGCAGAAAGTTAGAGAGAGATTTTCATTCAAAACAATGTCAAAGGTAGATATCCTGGATGATGGGTACAAATGGAGGAAATATGGAAAGAAGATGGTGAAGAACAATCCCAACCCAAGGCATTACTATAGGTGTTCAGTGGAGGGGTGCACTGTAAAAAAGACAGTAGACAGAGATAGGGATGATCCAAGGTATGTAATAACAACCTACGAAGGAACGCACATTCACCCAGGTCTGTAA 477 0.3941 MSDKNERAADFSLDSDFTNHLSAELSEYLKFDDINEWLVDDDLQSFISSQEHQANVVSHFGEGACHYEGSSTRGNSSGYQQKVRERFSFKTMSKVDILDDGYKWRKYGKKMVKNNPNPRHYYRCSVEGCTVKKTVDRDRDDPRYVITTYEGTHIHPGL 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0066 158 Pfam WRKY DNA -binding domain 99 155 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal8g0066 158 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 157 - -
Lal8g0066 158 SMART WRKY_cls 98 157 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal8g0066 158 Gene3D WRKY domain 85 151 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal8g0066 158 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 157 IPR044810 GO:0003700
Lal8g0066 158 ProSiteProfiles WRKY domain profile. 93 158 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal8g0066 158 SUPERFAMILY WRKY DNA-binding domain 90 156 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0066 Lal-Chr8 507952 512793 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0066 9 158 WRKY Transcription Factor Family AT5G26170 44.444 1.25e-38 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal8g0066 WRKY 1.4e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0066 - - lang:109358189 245.358