Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0053 ATGGAAATGGAAATGGATTGTTCAGGTGCCTCCACTGGCTGGCTTTATGATTATAACATTGATGTTGTTGGAAATGACTTCATGGCTACAGATTCTGTTGCTTTCACCTGGCTGCCTCAGACTCACACCTTCAACCATCCTTCTAATAATATCAGCTTGGATATGGAATACTCACTGGATTCAACTCCACTAGAAAATGGCCCTTCAAAGCGGTTTCTTGAATTGAGTTCTTTCTTGGAGCCTGGTAGGCCGCCTAAAGCAGACAAGGTCGCTATACTAAGTGATGCAGTTCACATGGTAACCAACTTAAGAAATGAAGCACAAAAGCTGAAGGAAATGAATGATGAATTACTTCTCAAAGTTAGAGAACTGAAGGTTGAGAAGAAAGAGCTTCGTGACGAGAAGAATATGCTGAAGGCAGATAAGGAAAAGTTGGAGCAACAGATAAAACTGACAAATGTGCAGCCAAGATTCCTCCCTCATCCGGCAGTTGCTAAAGGGGCGGATGCTGCTAATCACAAGCTGATGCCTTTCATCGGTTACCCTGGAATCGCCATGTGGCAGTTCATGCCTCCTGCTATCGTTGATACATCAAAGGATCATCTGCTTCGGCCTCCGGTGGCTTAA 627 0.4418 MEMEMDCSGASTGWLYDYNIDVVGNDFMATDSVAFTWLPQTHTFNHPSNNISLDMEYSLDSTPLENGPSKRFLELSSFLEPGRPPKADKVAILSDAVHMVTNLRNEAQKLKEMNDELLLKVRELKVEKKELRDEKNMLKADKEKLEQQIKLTNVQPRFLPHPAVAKGADAANHKLMPFIGYPGIAMWQFMPPAIVDTSKDHLLRPPVA 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0053 208 PANTHER BHLH DOMAIN CLASS TRANSCRIPTION FACTOR 70 208 - -
Lal8g0053 208 Coils Coil 93 155 - -
Lal8g0053 208 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 70 126 IPR036638 GO:0046983
Lal8g0053 208 Gene3D - 69 132 IPR036638 GO:0046983
Lal8g0053 208 PANTHER BHLH TRANSCRIPTION FACTOR 70 208 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0053 Lal-Chr8 434037 435863 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0053 71 208 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 61.644 6.51e-56 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0053 - - gmx:100806838 264.618