Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0043 ATGGGAAGAAGCCAGAGTTACTTTAAGGTTTTGATTGTTTGTATTGTGTCATTAATTGCCTCCACTCATGCTCAATTGCAGCTTGGTTTCTATGCTAAAAGCTGCCCAAAAGCTGAAGAAATCATTGCAGACTTTGTTCATGAACATATCCACAATGCTCCATCACTTGCAGCTGCCTTAATAAGAATGCACTTCCATGATTGTTTTGTCAGGGGATGTGATGCATCAGTACTTCTGAACTCAACAACCAACCAAGCTGAAAAGAATGCTCCTCCAAATCTTACACTTAGAGGCTTTGACTTCATTGATAGGATAAAAAGTCTTGTTGAAGTTGAATGCCCTGGTGTTGTGTCTTGTGCTGATATAATAGCTTTGGCTGCAAGAGACTCCATTCTCTACACAGGTGGACCTTCCTGGAAAGTGCTAACAGGTAGAAGAGATGGAATCATCTCTAACATAACAGAAGCCACAAACAGCATTCCTTCTCCATTTAGCAACTTCACCACACTCCAAACACTATTTGCCAATGAAGGACTTGATTTAAAAGACTTGGTCCTTCTCTCTGGTGCTCACACAATTGGTATTTCCCATTGCACATCATTCTCAAACCGTCTTTACAATTTTAGTGGCAAGGGTGACCAAGATCCATCGTTAGATAGTGAATATGCAAAAAATTTAAAGACCTTCAAATGCAATAATATAAATGATAACACCACATTAGTTGAAATGGACCCTGGAAGCCGCAAAACATTTGATCTAGGCTACTACCATCAGGTTGTTAAGAGAAGGGGTTTATTTCAGTCAGATGCTGCATTGCTCACTAACTCTGTTACAAAATCACTAGTTCACCAATTCCTTCAAGGCTCACTTCAAAATTTCTATGCTGAATTTGCCAAGTCGGTTCAGAAATTGGGTCAAACTAAAGTCAAGACTGGGACACAAGGTGAAATCAGGAAGCAATGTGCAGTCATAAATAGCTAA 981 0.3965 MGRSQSYFKVLIVCIVSLIASTHAQLQLGFYAKSCPKAEEIIADFVHEHIHNAPSLAAALIRMHFHDCFVRGCDASVLLNSTTNQAEKNAPPNLTLRGFDFIDRIKSLVEVECPGVVSCADIIALAARDSILYTGGPSWKVLTGRRDGIISNITEATNSIPSPFSNFTTLQTLFANEGLDLKDLVLLSGAHTIGISHCTSFSNRLYNFSGKGDQDPSLDSEYAKNLKTFKCNNINDNTTLVEMDPGSRKTFDLGYYHQVVKRRGLFQSDAALLTNSVTKSLVHQFLQGSLQNFYAEFAKSVQKLGQTKVKTGTQGEIRKQCAVINS 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0043 326 PANTHER PEROXIDASE 25-RELATED 4 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal8g0043 326 SUPERFAMILY Heme-dependent peroxidases 25 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lal8g0043 326 ProSiteProfiles Plant heme peroxidase family profile. 25 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal8g0043 326 PANTHER PEROXIDASE 4 325 - -
Lal8g0043 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Lal8g0043 326 Gene3D - 29 325 - -
Lal8g0043 326 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal8g0043 326 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal8g0043 326 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal8g0043 326 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal8g0043 326 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal8g0043 326 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal8g0043 326 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal8g0043 326 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal8g0043 326 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal8g0043 326 Pfam Peroxidase 43 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal8g0043 326 Gene3D Peroxidase, domain 2 161 304 - -
Lal8g0043 326 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Lal8g0043 326 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal8g0043 326 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal8g0043 326 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal8g0043 326 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal8g0043 326 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal8g0043 326 CDD secretory_peroxidase 25 324 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0043 Lal-Chr8 372217 374003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0043 15 326 Peroxidase AT1G05260 67.308 1.14e-166 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0043 K00430 - gmx:100803114 526.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0041 25 281004 282999 Lal8g0043 8 372217 374003 LSH
Lal8g0043 8 372217 374003 Lal2g0423 2 2530125 2531994 PCT
Lal2g0423 2 2530125 2531994 Lal8g0043 8 372217 374003 PCT