Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0035 ATGATAATAACACTATATAAAGGCCGCAATTGCATTAAAAAACAGAGAGAAAAGAAGAAGATGGGGTGGAGTAGAGGCCACATCATAGGCCATGGTTCCTCAGCCATGGTCTACCTCGCCACCTCTGACCACTCCTCCTCCTCAGCTTCCACCACCTCCATCTCCGCCGTCAAGTCATGGGAGCTGTCAAGGTCTGAACATCTTCAAAGAGAACAAAAGATTTTGTCCTCTTTATCCTCTCCTTACATAGTTACCTACAAAGGCTATGACATCACCACAGAAAACAATACCCTCTTCTACAATCTCTTCATGGAGTACATGCCTTTCGGTACGCTCACTCAATCCACTCTCCGCCACCACCACGGTGGCCGGATTAATGAGCCTGTGATAGCACACTATACAAGACAAGTGTTGCAAGGGCTAGAATACTTACATTCAAAAAGGTTGGTGCATTGTGACATAAAGGGTAGCAATATATTGGTCAATGAAGATGGAGCCAAAATTAGTGACTTTGGATGTGCCAAGTATGTCAATAATAATGAGCTGCCACCGGGGGCTGCTGCCGTGATTAGTGGCACACCGATGTTTATGTCGCCGGAGGTGGCGCGTGGACAAGAACAAGGGTACCCTTGTGATATTTGGGCTCTAGGATGCACCATGGTTGAAATTGCAACTGGGTTTGCACCATGGCCTAACGTGGAAGACCCTGTTTCCATTTTGTACCATATTGCATATTCTAACGAGGTTCCTAAGATTCCAAGTTTTCTATCCAATCAAGCAAAGGATTTCTTGGGGAAATGTTTTATGAGGAATCCGAAGGAGAGATGGAGTGCTAGTCAACTTTTAAAGCATCCATTTCTTGTGGAATTCAATTCCAAAGGTAAGCAAATATTGGAATCTAATTCATGTTCACCAACTAGTATTCTTGACCAAGGCTTTTGGAATTCTGTGGAGGAATCAGAATGCCATTTTGGTAACAATTTGGTTCGGACAAGTTTTGAAAATTCTGCAGCTGGTAGGATCAGAGGGCTAGCTTTGCGTTCAGGGGATCCTGATTGGACATGGGATGATAAGAACTGGGTCACAACAATAGGGAATAATGAAGCAGTGGCTGAGGCTGAGGCATGCGATTATGGGCTTTTTGATTCCGAGACTAGAAATTATTGCATGAGCGTGGCACATGAGGAAGGTGAGGCCAAGAATGATGAGTCACACATAGAGGAAGGAATCAATAACAAACTTGCAGAGAAAGTGGAATGGGGACAC 1266 0.4439 MIITLYKGRNCIKKQREKKKMGWSRGHIIGHGSSAMVYLATSDHSSSSASTTSISAVKSWELSRSEHLQREQKILSSLSSPYIVTYKGYDITTENNTLFYNLFMEYMPFGTLTQSTLRHHHGGRINEPVIAHYTRQVLQGLEYLHSKRLVHCDIKGSNILVNEDGAKISDFGCAKYVNNNELPPGAAAVISGTPMFMSPEVARGQEQGYPCDIWALGCTMVEIATGFAPWPNVEDPVSILYHIAYSNEVPKIPSFLSNQAKDFLGKCFMRNPKERWSASQLLKHPFLVEFNSKGKQILESNSCSPTSILDQGFWNSVEESECHFGNNLVRTSFENSAAGRIRGLALRSGDPDWTWDDKNWVTTIGNNEAVAEAEACDYGLFDSETRNYCMSVAHEEGEAKNDESHIEEGINNKLAEKVEWGH 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0035 422 ProSiteProfiles Protein kinase domain profile. 23 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0035 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Lal8g0035 422 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 21 380 - -
Lal8g0035 422 SMART serkin_6 23 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0035 422 PANTHER MAP KINASE KINASE KINASE 21 380 - -
Lal8g0035 422 Gene3D Transferase(Phosphotransferase) domain 1 14 336 - -
Lal8g0035 422 ProSitePatterns Protein kinases ATP-binding region signature. 29 58 IPR017441 GO:0005524
Lal8g0035 422 SUPERFAMILY Protein kinase-like (PK-like) 22 295 IPR011009 -
Lal8g0035 422 Pfam Protein kinase domain 25 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0035 422 CDD STKc_MAPKKK 23 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0035 Lal-Chr8 309994 313260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0035 21 317 MAP Kinase Kinase Kinase AT2G32510 51.485 5.06e-103 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lal8g0035 Pkinase 9.7e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0035 K20716 - gmx:100786897 463.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0057 25 409954 410994 Lal8g0035 8 309994 313260 LSH
Lal8g0035 8 309994 313260 Lal9g0367 9 2447080 2448318 PCT
Lal9g0367 9 2447080 2448318 Lal8g0035 8 309994 313260 PCT