Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0034 ATGCATCTCTTCTCTCTCTCTCTCTCTTATTCCATTGAAATTGATGGCCACAGTGGTTGGACTCAACATCGATTCAGATCCAATAATTGCAAAGAAATCCTTGTTAATAAAAGTAACAAACCCAAGTTCAAAAACATCATTAACATGGATGCCACAGATAGTAACAGCAATATACCCTTCCAAGTCAACCTTAGTTGCAGTCCTTCACCCTCTGATGATGATATTGATGAGAACAACAACAATGAAAGACCCTTCATTGATGAGATGGACTTCTTCTCTGATCATCATAACAACAATAACATTCTTGCCTCTGCCTCTGCCTCTGCACCACCACCTCATTCACATCTTCATCATCATGATCATTCCACCACTACCCCTATCTTGGAATTCAAAGTAAACGTTCTTGGAATTCAACCATACGAAGTCGTATATCTCTATCTATGTTTATTGGTTGAGAGATACTCTTGTCCTACGACTGGTCTCAACCTTCGTACTACCAGCAGTGATCAATCTATGGTGGACGATGATATCTCACTAAATTCAGAAGAAAAAAGAACTAACAATGAGCTGGTTGTTCTTCATGCGGAGCTGGCGCGAATGAAGGTGGAGAATCTTCGGTTGAGGAGCCTGGTTGATGATGCTAAATCCAATTACAATGACTTGCATGTGCATTTGTTGAATTTGATGCAAGAAAAGAAGGGAAAGGGCAGAGAAGAAAACCAGCAACAAGTGTTTGATGGAAAACAAAAAGAGAAGAAACAAAGTGAGAATGGAGGAGGCTTGGTGCCAAGGCAGTTTATGGATCTTGGGTTGGCTACTAATGCTGCTGATATGGATGAGACAGTGGGTTCTTCATCAGTGGGAAGAAACAAGGATCAATGGAAGTCTCCTGTGAATAATGGAGAGGTGGCTTCCAAAGAATTAGAGAACATGAAGAATGGAGATGGTAGTGATGAAGGAGTTGTAGTGTTTGATAAAGACAAAAAGGAAATTCATAGAGGAATTGAGAGAGAGGATAGTCCACCAGATCAGGTTTTAGGCACTAATAGGGTTCCAAGGTTTAGTCCTACAAATGATCAAACTGAGGCCACCATGAGGAAGGCTAGAGTTTCTGTTAGAGCTAGATCAGAGGCAACCATGATCACTGATGGGTGTCAATGGCGAAAGTATGGGCAGAAGATGGCCAAAGGAAACCCATGTCCTCGAGCATATTACAGGTGCACCATGGCTTCTGGTTGCCCTGTAAGAAAACAGGTACAAAGGTGTGCAGAAGACAAAACAATACTCATCACAACATATGAAGGAAATCACAACCACCCATTGCCTCCAACAGCTATGGCAATGGCACAAACCACTTCTTCAGCTGCAAGAATGCTGCTTTCAGGATCCATGTCAAGCGCGGATGGGCTAATGAATGCAAACTTCCTGACAAGGACACTCCTTCCATGCTCTTCAAGCATGGCAACTATCTCAGCATCAGCACCATTCCCAACTGTTACATTGGACTTAACTCAATCTCCAAACCCTTTACAATTCCCAAAGCCCCAAACTCAATTCCAAATCCCCTTCCCATCAGGTGTCAATTCCACACCTTCATTATTGCCTCAGATATTTGGTCAAGCAGTCTATAACCAGTCACTGTTTTCTGGTCTTCAAATGTCTCAAGATGGTAATCAATCACAACAGCAACAGCCCCAAATTGCTGACACAGTTGGTGCTTCCATTGCAGCTGATCCTAACTTGACTGCAGCTTTGGCTGCAGCTATTACTTCAATCATTGGTGCTGCTCAACCAAACAACAACAATAACAACAACAACAACAACAACAACAACAACAACACTAGTACATCCAATAACAGCAATGGCAATATTACATCAACTAATAACTAA 1890 0.4196 MHLFSLSLSYSIEIDGHSGWTQHRFRSNNCKEILVNKSNKPKFKNIINMDATDSNSNIPFQVNLSCSPSPSDDDIDENNNNERPFIDEMDFFSDHHNNNNILASASASAPPPHSHLHHHDHSTTTPILEFKVNVLGIQPYEVVYLYLCLLVERYSCPTTGLNLRTTSSDQSMVDDDISLNSEEKRTNNELVVLHAELARMKVENLRLRSLVDDAKSNYNDLHVHLLNLMQEKKGKGREENQQQVFDGKQKEKKQSENGGGLVPRQFMDLGLATNAADMDETVGSSSVGRNKDQWKSPVNNGEVASKELENMKNGDGSDEGVVVFDKDKKEIHRGIEREDSPPDQVLGTNRVPRFSPTNDQTEATMRKARVSVRARSEATMITDGCQWRKYGQKMAKGNPCPRAYYRCTMASGCPVRKQVQRCAEDKTILITTYEGNHNHPLPPTAMAMAQTTSSAARMLLSGSMSSADGLMNANFLTRTLLPCSSSMATISASAPFPTVTLDLTQSPNPLQFPKPQTQFQIPFPSGVNSTPSLLPQIFGQAVYNQSLFSGLQMSQDGNQSQQQQPQIADTVGASIAADPNLTAALAAAITSIIGAAQPNNNNNNNNNNNNNNNTSTSNNSNGNITSTNN 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0034 629 MobiDBLite consensus disorder prediction 338 358 - -
Lal8g0034 629 SUPERFAMILY WRKY DNA-binding domain 374 442 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal8g0034 629 SMART WRKY_cls 381 441 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal8g0034 629 MobiDBLite consensus disorder prediction 232 257 - -
Lal8g0034 629 ProSiteProfiles WRKY domain profile. 376 442 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal8g0034 629 Gene3D WRKY domain 366 443 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal8g0034 629 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 69 618 IPR044810 GO:0003700
Lal8g0034 629 MobiDBLite consensus disorder prediction 102 121 - -
Lal8g0034 629 PANTHER OS05G0567200 PROTEIN 69 618 - -
Lal8g0034 629 MobiDBLite consensus disorder prediction 598 629 - -
Lal8g0034 629 MobiDBLite consensus disorder prediction 232 263 - -
Lal8g0034 629 Pfam WRKY DNA -binding domain 383 440 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0034 Lal-Chr8 300547 303484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0034 159 607 WRKY Transcription Factor Family AT1G62300 49.160 6.66e-122 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal8g0034 WRKY 3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0034 - - lang:109357814 754.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0034 8 300547 303484 Lal1g0502 1 3222229 3227534 PCT
Lal8g0034 8 300547 303484 Lal2g0402 2 2418316 2421446 PCT
Lal1g0502 1 3222229 3227534 Lal8g0034 8 300547 303484 PCT
Lal2g0402 2 2418316 2421446 Lal8g0034 8 300547 303484 PCT