Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0027 ATGGATCCATTGATCCGCAAGTTCCGGCGCCACCTTCTCTCTTGGCTTCACCGATCTCGTTCCGGTTCGGTGCTCTTTGTGAGGAGAGTTTCATACAAGGATGTTAGAAGTGCCACAGATGGTTTCCGCAGAATTATTTATAGCAATTCCGAAGTTTCTGCATATGCTGCCAATTTTGAAGACAGTGGTGTTTGTTTGGTAAAAGAAGTGAAACATTTTGATGATGAAGCAAATAGTGACACTTTCTTCAGTCAAGTACAACTCTTGGGGCGGTTGCATCATCGCCACCTTCTTTCACTCAAAGGCTTCTCTCTCGGGCATAAACACAAGAGACTGCTCATATTTGACAATATAGAAAATGGAAGCTTAAAGGAGCATCTCAATGACCCTTTAAAGACTCCCTTAAATTGGAGGACAAGGTTAAAGATCGCTAATGATGTTGTGGCCGCACTGGAATACTTATTTCTTTTCAGTGAACCACCTGTATGTCATGTCTCCATAAGCTCAAGCAATATCATGTTAGATGAGACCTTCACGGCTAAACTATCCGACTTTGGGTTTTTTACTCCTGGTGGAAATTCTGTTGTTACGCCATCTTCAAAAGATTGCATGGGGCAGATTGTATTCCAACTTGGAGTACTCATACTAGAACTGGTGACAGGTCAGTCTTCAGAGATGGAAGGTTCAGATCTGATAGAATGGATCAAAGAATCTCGATTTTACAGTTCCATAGATAAGATGATAGATCCTGATCTTGGAAACAATTATGACTGTAGGGTGCTTAAAAGTCTGCTAGGTGTGGCTAAACTATGTATCAAATCAAAGGACAAGCCATCTTCATTCACAATGCCTCAGTTATTTCGTTATCTCCAAATGAGGAGTGATATATGA 891 0.4108 MDPLIRKFRRHLLSWLHRSRSGSVLFVRRVSYKDVRSATDGFRRIIYSNSEVSAYAANFEDSGVCLVKEVKHFDDEANSDTFFSQVQLLGRLHHRHLLSLKGFSLGHKHKRLLIFDNIENGSLKEHLNDPLKTPLNWRTRLKIANDVVAALEYLFLFSEPPVCHVSISSSNIMLDETFTAKLSDFGFFTPGGNSVVTPSSKDCMGQIVFQLGVLILELVTGQSSEMEGSDLIEWIKESRFYSSIDKMIDPDLGNNYDCRVLKSLLGVAKLCIKSKDKPSSFTMPQLFRYLQMRSDI 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0027 296 SMART tyrkin_6 25 287 IPR020635 GO:0004713|GO:0006468
Lal8g0027 296 Gene3D Phosphorylase Kinase; domain 1 17 116 - -
Lal8g0027 296 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 294 - -
Lal8g0027 296 SUPERFAMILY Protein kinase-like (PK-like) 25 240 IPR011009 -
Lal8g0027 296 ProSiteProfiles Protein kinase domain profile. 32 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0027 296 PANTHER OS01G0253100 PROTEIN 1 294 IPR045271 GO:0004714|GO:0006468
Lal8g0027 296 Gene3D Transferase(Phosphotransferase) domain 1 208 295 - -
Lal8g0027 296 Gene3D Transferase(Phosphotransferase) domain 1 118 207 - -
Lal8g0027 296 Pfam Protein tyrosine and serine/threonine kinase 61 188 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0027 Lal-Chr8 269550 273524 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0027 22 295 Receptor kinase-like Gene Family AT3G19300 36.120 4.95e-52 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Lal8g0027 PK_Tyr_Ser-Thr 2.2e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0027 - - aprc:113853565 450.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0027 8 269550 273524 Lal8g0027 8 269550 273524 ECH