Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0022 ATGGAAAGTGCCACCAAAATGAAAGTTTCCATCTCTCTCTTTTTTGGCCTAATTATTACAATGTGTTATGGTGCCACAAACCCAAATGATCTCAAAGTTCTGAATGATTTCAGAAAAGGGTTGGAAAATCCAAGGCTTCTAAAATGGCCAGAAAATGGAGATGACCCTTGTGGTCCTCCTTCATGGCCTTATGTATTCTGTTCTGGAGATAGGGTCACTCAGATTCAAGCTAAGAATCTTGGTCTTAGAGGTTCATTACCTCAAAACTTCAACCAACTCTCAGAACTATACAACTTGGGTCTTCAAAGGAACAACCTTAGTGGAATGTTACCTAGTTTCAGTGGATTATCCAAACTGGAATTTGTTTTCTTGGATTACAATGCATTTGATGTGATCCCTTCCGACTTCTTTAATGGACTCAGCAGCCTTAGGGTCTTGTCTTTGGAGGAAAATTCACTGAATGCAAGTGCTGGTTGGTTATTCCCCATGGATTTAGAAAATTTGGTGCAATTGACAAATCTTTCTCTTGTGCACTGTAACCTGGTTGGGCAATTGCCTGATTTTCTAGGCGCATTGCCATCCCTCACCAATTTGAGGCTTTCGGGCAACAAACTTTGTGGTACTATTCCTGCAAGTTTCGCTCAATCTTCATTCCAGGTTTTGTGGTTGAACGATCAAGAAGGCGATAAACTAACTGGTCCTATCAATGTTATTACTTCAATGGTTTCCCTAAGACAACTTTGGCTACATGGAAACCATTTCACAGGGACAATTCCACAGGATATTGGAAATCTCACTTCCTTACAGGAACTCAACCTTAATGGCAATCAACTTGTTGGTATGATTCCAGATTCGCTAGCAGATATGGACCTTGAGATATTGGTATTGAATAATAACAAGCTAATTGGTCCGATACCTGAGTTTAAGGCTGCCGATATTTCTTTTGATAACAATTTCTTTTGTCAGCCTAAGCCTGGGCTTGAATGTGCACCTGAAGTTACTGCACTACTGGATTTTCTGGATGATCTGAATTATCCATCTTTTCTCATTAATGATTGGTCAGGTAATAAACCATGCACAGAAAGCACAGGTTCATGGTTTGGATTGAGATGCAATTCCAACTCAGAGGTATCTATAATAAACTTACCTAAGCAAAGGCTAAATGGTACTTTGAGTCCTTCATTAGCTAAATTAGAATCACTCCTTGAAATTAGGCTAAATGGAAACAATATAGCTGGCACAGTTCCTAGTAATTTTACTGAATTGAAATCTTTGAGATTGTTGGACTTAAGTGATAACAATTTTGAGCCTCCATTACCAAGCTTTCATGATGGTGTGAAGGTTATAACTGAAGGTAACCCTCTTCTTGTGAATCAAATTGGACCTATTAGAAGTCCACCACCCGAAGATTCACATTCTTCAGTGCATAAAGTCTCACCTCCTTCATCATCTCATAAGTCACTTGTTCCAAGTAAGAGCTCAATCTCGATTCAATCCAAACCAAATGGCTTCAAAAGATTCAAAACAATAGCAACAGTGGCTGGTGTTGCAGTCCTTGCATTTCTAGCTATTTCTGTTGTTTATCTCTTCATATGTTGCTGGAAGAAGAAAAAGGCCTCAATGGAAGCTCCAAGTTCCATTGTGGTTCACCCTAGAGATCCAGCTGCTTCAGAAAACATGGTTAAAATTGCAGTCTCAAATAGCACCACCACCGCGGGAAGCTTATCAACAAAGACTGGCACAAGTTCTCTCAGTAACATTAGTGGTGAAACTCAAAACTCTTATGTGACTAAGGCTGGCAACCTTGTTATCGCGGTTCAAGTACTGCGCATTGTTACTAATGACTTCGCTTCAGAAAATGAGCTAGGCCGTGGTGGATTTGGAACTGTTTACAAGGGTGAACTAGAAGATGGGACAAAAATTGCAGTTAAAAGAATGGAGCTTGGAGTTATTAGTAGTAAGGCACTGGAAGAATTTGAAGCTGAAATCGCCGTTCTTTCCAAGGTTCGCCACAGACACTTGGTATCACTATTAGGGTATTCCATTGAAGGAAATGAGAGACTTCTGGTCTATGAATATATGCCACTTGGTGCTCTAAGCCAGCATCTTTTTCATTGGAAAAGTTTGAAGTTGGAGCCTTTGTCGTGGTCACAAAGGCTTGCAGTAGCACTAGATGTTGCTAGAGGCATGGAATACCTTCATGGTCTAGCTCGCGAGACCTTCATCCACAGAGACCTCAAGTCTTCTAATATTCTACTTGGTGATGATTTTCGTGCAAAAGTTTCAGATTTTGGGTTGGTGAAGCTTGCACCGGATGGTGAGAAATCTGTAGTAACCAAACTTGCTGGGACATTTGGATACCTTGCTCCTGAATATGCCGTGATGGGGAAAATCACCACAAAAGTTGATGTGTTTAGCTATGGTGTGGTGTTGATGGAACTTCTGACTGGACTAATGGCGCTTGACGAGAGTCGGCCAGAGGAAAGCCGGTACCTCGCTGAATATTTTTGGCGAATTAAATCGAGCAAACAAAAACTCATGGCTGCGATTGATCCAGCTCTTGGTGCAAGCGAAGATACATTTGAGAGCATAAACATTGTAGCTGAACTTGCTGGACATTGCACTGCAAGAGAAGCCAACCATAGGCCAGATATGAGTCATGCTGTGAATGTACTAGTAGCACTAGTAGAGAAATGGAGACCAGTTGATGATGAATTATTAGATGACTACTATGGCATTGATTATAGTAGACCACTTCAGCAAATGTTGAAAATTTGGAAGGAAGCAGAAAGCAAAGAGTTTAGTTATGCTGCTAGTCTTGAAGATAGTAAAGGCAGCATAGCAGTAAGGCCCTTAGGTTTTGCAGAATCCTTTACTTCAGCTGATGCTCGATGA 2895 0.4083 MESATKMKVSISLFFGLIITMCYGATNPNDLKVLNDFRKGLENPRLLKWPENGDDPCGPPSWPYVFCSGDRVTQIQAKNLGLRGSLPQNFNQLSELYNLGLQRNNLSGMLPSFSGLSKLEFVFLDYNAFDVIPSDFFNGLSSLRVLSLEENSLNASAGWLFPMDLENLVQLTNLSLVHCNLVGQLPDFLGALPSLTNLRLSGNKLCGTIPASFAQSSFQVLWLNDQEGDKLTGPINVITSMVSLRQLWLHGNHFTGTIPQDIGNLTSLQELNLNGNQLVGMIPDSLADMDLEILVLNNNKLIGPIPEFKAADISFDNNFFCQPKPGLECAPEVTALLDFLDDLNYPSFLINDWSGNKPCTESTGSWFGLRCNSNSEVSIINLPKQRLNGTLSPSLAKLESLLEIRLNGNNIAGTVPSNFTELKSLRLLDLSDNNFEPPLPSFHDGVKVITEGNPLLVNQIGPIRSPPPEDSHSSVHKVSPPSSSHKSLVPSKSSISIQSKPNGFKRFKTIATVAGVAVLAFLAISVVYLFICCWKKKKASMEAPSSIVVHPRDPAASENMVKIAVSNSTTTAGSLSTKTGTSSLSNISGETQNSYVTKAGNLVIAVQVLRIVTNDFASENELGRGGFGTVYKGELEDGTKIAVKRMELGVISSKALEEFEAEIAVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPLGALSQHLFHWKSLKLEPLSWSQRLAVALDVARGMEYLHGLARETFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPDGEKSVVTKLAGTFGYLAPEYAVMGKITTKVDVFSYGVVLMELLTGLMALDESRPEESRYLAEYFWRIKSSKQKLMAAIDPALGASEDTFESINIVAELAGHCTAREANHRPDMSHAVNVLVALVEKWRPVDDELLDDYYGIDYSRPLQQMLKIWKEAESKEFSYAASLEDSKGSIAVRPLGFAESFTSADAR 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0022 964 Pfam Leucine rich repeat 123 181 IPR001611 GO:0005515
Lal8g0022 964 SMART serkin_6 616 893 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0022 964 ProSitePatterns Serine/Threonine protein kinases active-site signature. 741 753 IPR008271 GO:0004672|GO:0006468
Lal8g0022 964 Gene3D Ribonuclease Inhibitor 331 459 IPR032675 -
Lal8g0022 964 ProSiteProfiles Protein kinase domain profile. 616 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0022 964 CDD STKc_IRAK 622 892 - -
Lal8g0022 964 Pfam Protein tyrosine and serine/threonine kinase 619 890 IPR001245 GO:0004672|GO:0006468
Lal8g0022 964 Gene3D Phosphorylase Kinase; domain 1 577 693 - -
Lal8g0022 964 MobiDBLite consensus disorder prediction 475 496 - -
Lal8g0022 964 SUPERFAMILY L domain-like 26 308 - -
Lal8g0022 964 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
Lal8g0022 964 Pfam Leucine rich repeat N-terminal domain 331 372 IPR013210 -
Lal8g0022 964 Gene3D Transferase(Phosphotransferase) domain 1 694 909 - -
Lal8g0022 964 SMART LRR_typ_2 116 139 IPR003591 -
Lal8g0022 964 SMART LRR_typ_2 265 288 IPR003591 -
Lal8g0022 964 SMART LRR_typ_2 140 163 IPR003591 -
Lal8g0022 964 SMART LRR_typ_2 241 264 IPR003591 -
Lal8g0022 964 SMART LRR_typ_2 422 444 IPR003591 -
Lal8g0022 964 SMART LRR_typ_2 192 215 IPR003591 -
Lal8g0022 964 SMART LRR_typ_2 398 421 IPR003591 -
Lal8g0022 964 SMART LRR_typ_2 93 115 IPR003591 -
Lal8g0022 964 SUPERFAMILY L domain-like 331 442 - -
Lal8g0022 964 MobiDBLite consensus disorder prediction 460 496 - -
Lal8g0022 964 PANTHER OSJNBA0070M12.3 PROTEIN 6 964 - -
Lal8g0022 964 PANTHER OSJNBA0070M12.3 PROTEIN 6 964 - -
Lal8g0022 964 SUPERFAMILY Protein kinase-like (PK-like) 595 892 IPR011009 -
Lal8g0022 964 ProSitePatterns Protein kinases ATP-binding region signature. 622 644 IPR017441 GO:0005524
Lal8g0022 964 Gene3D Ribonuclease Inhibitor 28 325 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0022 Lal-Chr8 249020 253223 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0022 84 910 Receptor kinase-like Gene Family AT1G55610 30.331 8.57e-77 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Lal8g0022 PK_Tyr_Ser-Thr 4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0022 - - gmx:100785090 1495.33