Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0013 ATGGATTTTTCATCATGGGTTAACACTTCATTGAATCTCAACATTAATCCCCCAAGATTTCATGAACAAGTTATTAAAAAGGAGGTGGAAAACAATTTTAACTCATTGGGTATGAGGATGTCTTCTTCGAAAGAAGAGCCCACTACTGCTATGGTGGAGGAGCTGAAGAGGGTGAGTGCAGAAAACAAGAAGCTGACTGAAATGCTGACAGAGATGTGTGAGAGCTACAACACTTTGAGAAGCAACTTGGTGGATTATATGAGGAAGAATCCTGATAAGGATCAGCACAACTCATCATCCAAGAGAAGAAAGTCTGAAAGCAGCAACAATAACAATAGTAATGCAATGGTAGTATATAATGGTAACTCTGAGAGCAGTTCAACTGATGAGGAATCATGCAAGAAACAAAGGGAAGAGATCATCAAAGCAAAAATTTCTAGAGTTTATGTTAGGACACAAGGATCTGATAGAAGCCTTATTGTGAAAGATGGATATCAGTGGAGGAAATATGGACAAAAGGTGACTAGGGATAACCCTTCTCCAAGAGCATACTTCAAATGCTCTTTTGCTCCTACCTGCCCAGTAAAAAAAAAGGTGCAGAGAAGTGTGGAAGATCAATCCATTCTAGTTGCAACTTATGAAGGAGAGCACAATCATCCTCACCCTTCTAAAATGGAGGCAACATCAGGCCCCAGCCACTGTGTGACCTTAAACTCAGCCTTTCCTAACTCTTCTGCACCAACAGTTACACTTAACCTCACAACATCTAAAAAGTCCATCATCAACGACTCTAAGAATCTAAATACAAACATTGTTACACCCCAAGTGCCACAGAATTTGGTGGAACAGATGGCAAACTCCTTGACCAAGGATCCTAACTTTAGAGCAGCACTTGTTGCTGCCATATCACGGGGAGCATTGCACAAGAAACAAGTAGAAAATTAG 945 0.4053 MDFSSWVNTSLNLNINPPRFHEQVIKKEVENNFNSLGMRMSSSKEEPTTAMVEELKRVSAENKKLTEMLTEMCESYNTLRSNLVDYMRKNPDKDQHNSSSKRRKSESSNNNNSNAMVVYNGNSESSSTDEESCKKQREEIIKAKISRVYVRTQGSDRSLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPTCPVKKKVQRSVEDQSILVATYEGEHNHPHPSKMEATSGPSHCVTLNSAFPNSSAPTVTLNLTTSKKSIINDSKNLNTNIVTPQVPQNLVEQMANSLTKDPNFRAALVAAISRGALHKKQVEN 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0013 314 Gene3D WRKY domain 144 223 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal8g0013 314 MobiDBLite consensus disorder prediction 88 103 - -
Lal8g0013 314 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 309 IPR044810 GO:0003700
Lal8g0013 314 ProSiteProfiles WRKY domain profile. 156 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal8g0013 314 SUPERFAMILY WRKY DNA-binding domain 158 222 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal8g0013 314 PANTHER TRANSCRIPTION FACTOR 1 309 - -
Lal8g0013 314 MobiDBLite consensus disorder prediction 88 133 - -
Lal8g0013 314 SMART WRKY_cls 161 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal8g0013 314 MobiDBLite consensus disorder prediction 104 127 - -
Lal8g0013 314 Pfam WRKY DNA -binding domain 162 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0013 Lal-Chr8 205218 207297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0013 4 310 WRKY Transcription Factor Family AT1G80840 50.779 1.50e-95 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal8g0013 WRKY 2.6e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0013 - - gmx:100798375 402.905