Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0008 ATGAAGGAAGAAGAGAAGGAGAAGATGATGATGATTGTGGACCTTGATGATGTTGAATCAACCTCTCCCAAATCACCCCATGCTTTCCATTTTGAGTCTGACTCAACCCTTAATCACACTCACAATTCCTCTTTCTTCAATATCAGGACCGTCTATCTTGTCTTCATTAAACCCAAGATCAACGTCTTACTCCCCTTTGGTCCTGTCGCTATCTTACTCCATTATCTCACTCCAAAACATCATCATGGATGGGTCTTCTTCTTCAGTTTACTCGGTATTACTCCTCTGGCTGAACGTCTCGGTTATGCTACTGAGCAGCTTGCTTTCTACACTGGACCAACAGTTGGAGGTCTCCTTAATGCAACATTCGGCAATGCAACTGAAATGATTATATCAATTTATGCATTGAATAACGATATGATTAGGGTTGTTCAGCAATCTTTACTCGGTTCAATCTTGTCAAATATGCTTCTAGTTCTTGGATGTGCTTTCTTCACTGGTGGTATTGTCCACCACAACAAACAACAGGCAGCTGCTGTTGTCAATTCTGGGTTGCTGTTGATGGCTGTCATGGGAATACTCTTCCCTGCAGTGCTTCACTTTACTCATTCTGAACTTCATTTCGGCAAGTCAGTCTTATCTCTATCAAGATTCAGCAGCTGTATAATGTTAGTGGCTTATGCAAGCTACCTTTTCTTTCAACTCAGAAGCCAGCAAAATCTTTATAATCCTGTTCAGGAGATAGCAGATAATAGTGAAAATTCTGAAGAGGGGGAAGAAATTGAATTAACTAAATGGGAAGCAATTGTATGGCTTGCTATTTTAACTGCATGGGTATCTGTATTGTCTGGATACCTTGTAGATGCCATAGAGGGAGCATCTGAGTCATTGAATATGTCAATGGCCTTCATTAGTGTTATCTTGCTTCCAATTGTGGGCAATGCTGCTGAGCATGCAAGCGCTATTATGTTTGCCATGAAGGACAAGCTTGATATAACAATTGGAGTTGCTGTTGGATCATCTACACAGATATCGATGTTTGTGATCCCCTTCTGTGTGGTTGTTGGATGGTGCATGGGAAAAGAAATGGACTTAAATTTTCAACTCTTTGAGACTGCCACACTTTTTATCACTGTGCTGGTAGTTGCATTTATGATGCAGGAAGGAACGTCAAATTATTTCAAAGGCTTGATGCTTATTCTATGCTATCTTATAGTGGCTGCCAGTTTTTTTGTACATGTAGACCCTCAAAATGGTGAGTTTACTGAGAATATGTAG 1278 0.4038 MKEEEKEKMMMIVDLDDVESTSPKSPHAFHFESDSTLNHTHNSSFFNIRTVYLVFIKPKINVLLPFGPVAILLHYLTPKHHHGWVFFFSLLGITPLAERLGYATEQLAFYTGPTVGGLLNATFGNATEMIISIYALNNDMIRVVQQSLLGSILSNMLLVLGCAFFTGGIVHHNKQQAAAVVNSGLLLMAVMGILFPAVLHFTHSELHFGKSVLSLSRFSSCIMLVAYASYLFFQLRSQQNLYNPVQEIADNSENSEEGEEIELTKWEAIVWLAILTAWVSVLSGYLVDAIEGASESLNMSMAFISVILLPIVGNAAEHASAIMFAMKDKLDITIGVAVGSSTQISMFVIPFCVVVGWCMGKEMDLNFQLFETATLFITVLVVAFMMQEGTSNYFKGLMLILCYLIVAASFFVHVDPQNGEFTENM 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0008 425 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 32 421 IPR004713 GO:0006812|GO:0008324|GO:0016021
Lal8g0008 425 Gene3D - 113 251 IPR044880 -
Lal8g0008 425 Gene3D - 255 412 IPR044880 -
Lal8g0008 425 TIGRFAM caca2: calcium/proton exchanger 55 411 - -
Lal8g0008 425 Pfam Sodium/calcium exchanger protein 84 235 IPR004837 GO:0016021|GO:0055085
Lal8g0008 425 Pfam Sodium/calcium exchanger protein 269 408 IPR004837 GO:0016021|GO:0055085
Lal8g0008 425 PANTHER VACUOLAR CATION/PROTON EXCHANGER 32 421 - -
Lal8g0008 425 TIGRFAM cax: calcium/proton exchanger 63 411 IPR004798 GO:0006816|GO:0015369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0008 Lal-Chr8 172425 175750 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0008 48 419 Antiporters AT3G13320 73.280 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0008 K07300 - gmx:100806000 652.514