Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0006 ATGCAATTAGCATCAAATGGTGGCAACAAGGATGATCATAATGAAATCCAACCCATCTTGAATCACCATTTCCATTCTCCTGCCGACACAGAAGGAGGAGACTCTTGTTCATTTTCATGTGAAATTATTCCTCCTCCTCTTCTCAACCCTGACAGCGATGATGATGATGATGATTTACATAATGTTCATGTAGATGTTGTTGATGAGACTTGTCATCTTGTAAATTCTTCTGATCACCACCCACAATGCCGTATATGCCTTGATATTGGAGGACAAGATTTAATTGCACCATGCCATTGCAAAGGTACTCAAAAGTATGTTCACAGATCATGTCTCGATAATTGGAGGTCTACAAAGGAGGGATTTGCCTTTTCTCACTGTACAGAGTGCAGAGCTGTTTTCATATTACGTGCTAATGTCCCACCTGATCGCTGGTGGTTGAGATTGAAGTTTCAGTTCCTTGTTGCGAGGGATCATGCTTTCATTTTTATAATTGTTCAACTGGTGGTTGCTTTCTTGGGGGTGCTTGTTTACAAATTTTATGGAGATGAACTGAGAGAAATGTTTGGTTATGAAGAACATCCATATGGATTTTACACGATGGCTGTTCTAGCCATTGTTTTGGTGGGTTTGCTTTATGGCTTCTTCATAGCCATAATATGTGGCCAAAGGATCAATGAACGCCACTACCATGTTCTTGCCAAACAAGAGTTGACAAAGGAATATGTGGTAGAAGATCGTGAACATGTAAAGAATGTGCCTGAACTTGATCCCAGCCATGTAACAGAACTAAGGATGTTGGGCCTTTACTAA 813 0.4034 MQLASNGGNKDDHNEIQPILNHHFHSPADTEGGDSCSFSCEIIPPPLLNPDSDDDDDDLHNVHVDVVDETCHLVNSSDHHPQCRICLDIGGQDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFSHCTECRAVFILRANVPPDRWWLRLKFQFLVARDHAFIFIIVQLVVAFLGVLVYKFYGDELREMFGYEEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYVVEDREHVKNVPELDPSHVTELRMLGLY 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0006 270 CDD RING_CH-C4HC3_MARCH 83 131 - -
Lal8g0006 270 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 2 269 - -
Lal8g0006 270 SUPERFAMILY RING/U-box 78 134 - -
Lal8g0006 270 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 76 135 IPR013083 -
Lal8g0006 270 SMART ringv_2 82 131 IPR011016 GO:0008270
Lal8g0006 270 ProSiteProfiles Zinc finger RING-CH-type profile. 75 137 IPR011016 GO:0008270
Lal8g0006 270 Pfam RING-variant domain 83 130 IPR011016 GO:0008270
Lal8g0006 270 PANTHER OS02G0132300 PROTEIN 2 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0006 Lal-Chr8 159227 162692 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0006 68 229 C3H Transcription Factor Family AT1G50440 73.457 7.56e-84 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0006 - - lang:109358456 538.495