Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1491 ATGATGGGTTCGGAGGAAAGGGATCGAGAGATAGAAGAGGGGATTTCAGGATCAATATCAAGATCAGGATCAATATCATCATCATCAGGATTGAGAGAGCCTCTTGTTTTGAATAACAATAATATTAATAAGAGAAGGAATACAACTTCTCAGCTAGCCATTGTTGGAGCTAATGTTTGTCCAATTGAGAGTCTTGATTATGAAATTATTGAAAATGAACTTTTCAAACAAGATTGGAGATCCAAAACTAAGAATGAGATTGCTCAATATATTTGCCTTAAATGGTCACTTTCTCTTTTAATTGGTTTACTCACTGCTCTTGTTGCCTTCTTCAATAACATTTCTGTTGAGAATATTGCTGGTTTCAAACTTTTATTCACCAATAATCTCATGCTCACCCAACACTATCATCAAGCATTCCTCGTTTATGTTTCTTCTAACATGATTTTATCCATTATTGCTGCTTCCTTATGTGCCTTTCTTGCACCTGCTGCTGCTGGCTCAGGCATCCCTGAGGTCAAGGCTTACCTTAATGGGGTTGATGCTCAAGCTATACTCGCTCCATCAACCCTCTTTGTTAAGATTTTTGGTTCTATTTTTGGGGTTGCTGCTGGTTTTGTTGTCGGTAAGGAAGGGCCTATGGTTCATACAGGTGCTTGCATTGCTAATTTTCTTGGACAAGGTGGTTCCAAAAGATATCGCCTCACATGGAAATGGCTCAGACATTTTAAAAATGACCGTGATCGAAGAGATTTGGTCACCTGTGGTGCCGCTGCTGGTGTTGCTGCTGCCTTCCGTGCTCCTGTTGGTGGTGTCCTTTTTGCACTTGAAGAAGCTGCTTCATGGTGGAGGAGTGCTCTTCTTTGGAGGACTTTTTTCACAACTGCTGTCGTAGCTGTTGTGCTTAGAGGTTTCATTCAATTATGCCATGGTGGAAAATGTGGTCTTTTTGGTGAAGGAGGCTTGATAATGTTTGATGTTAATTCAGCACATCCTGCTTATAGCACACCTGACTTGCTGGTTGTTATATTTCTTGGTGTTATTGGAGGTCTTTTCGGAAGCCTTTACAATTATCTTGTCGATAAGGTCCTTCGCGCCTACAGCATCATTAATGAGAGAGGCCCTATATTCAAAGTGTTACTTGTTATGTTTGTCTCCTTTTTGAGCTCTTGTTGTTCATTTGGCCTTCCATGGCTATCAAAGTGCATCCCTTGTCCTCCTCATTTGGGAGACGAGTGCCCTACTATAGAGCGCTCTGGACAATACAAGAATTTTCAGTGTCCACCTAACCACTACAATGACCTCGCCTCTCTGTTTTTCACGACTAATGATGATGCTATCCGTAACCTATTTATTGCTGGGTCCAACAAAAGATTCCAGTTTGCTAGTCTTGTAATATTTTTTGTGGCCATATACTTTCTTGGAATCATTACTTATGGTATTGCCATTCCCTCTGGGCTCTTTATTCCTGTCATACTTGCTGGAGCTTCATACGGGCGTCTTGTAGGGAGTATAGTAGACTCATTCACTGTTCTTGATGTGGGTTTGTTTGCCCTCCTTGGAGCTGCTTCCTTCCTTGGTGGCACCATGAGAATGACTGTTTCTCTTTGTGTCATACTTCTTGAACTGACTAATAATCTGCTGATGCTCCCTCTGGTCATGTTAGTTCTCCTCATTTCCAAGTCTGTGGCTGATTGTTTTAACAAAGGTGTTTATGATCAGATTGTAGAAATGAAAGGGCTACCTTATATGGAAGCACATGCAGAACCGTACATGAGACAATTAATTGCAAGTGATGTTGTTTCAGGTCCACTGTTTATATTTTCTGGGATTGAAAAAGTGGGGAATATTGTGCACACTTTAAAGGTAACAAGACATCATGGATTTCCTGTAATCGATGAGCCTCCTTTAACAGATGCTCCTGAGTTGTGTGGGTTGGTATTGAGGTCACATCTGCTTGTGCTTCTTAAACACAGAACATTTACAAAGGAAAGGGGGATGACAGGGTCATCCATTATGAGGAAATTCAAGGCACATGATTTTGCAAAGGCAGGTTCAGGAAAGGGGATCAACCTGGAGGATTTAGACATTTCTGAGGATGAGATGGAAATGTATGTTGACCTTCATCCAATTACTAATGGCTCGCCATATACGGTTCTCGAAACAATGTCTCTTGCTAAAGCAGCTGTTCTTTTCAGAGAGCTTGGCCTCAGGCACTTGTTGGTGGTGCCAAAGACACCTGCAAGGCCTCCAATTGTGGGGATCCTGACGAGGCATGATTTCATGCCTGCGCATGTCTTGGGACTATACCCTCACTTGGACCCTCACAAGCAGAGGGCCGATTAA 2346 0.4203 MMGSEERDREIEEGISGSISRSGSISSSSGLREPLVLNNNNINKRRNTTSQLAIVGANVCPIESLDYEIIENELFKQDWRSKTKNEIAQYICLKWSLSLLIGLLTALVAFFNNISVENIAGFKLLFTNNLMLTQHYHQAFLVYVSSNMILSIIAASLCAFLAPAAAGSGIPEVKAYLNGVDAQAILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIANFLGQGGSKRYRLTWKWLRHFKNDRDRRDLVTCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAVVLRGFIQLCHGGKCGLFGEGGLIMFDVNSAHPAYSTPDLLVVIFLGVIGGLFGSLYNYLVDKVLRAYSIINERGPIFKVLLVMFVSFLSSCCSFGLPWLSKCIPCPPHLGDECPTIERSGQYKNFQCPPNHYNDLASLFFTTNDDAIRNLFIAGSNKRFQFASLVIFFVAIYFLGIITYGIAIPSGLFIPVILAGASYGRLVGSIVDSFTVLDVGLFALLGAASFLGGTMRMTVSLCVILLELTNNLLMLPLVMLVLLISKSVADCFNKGVYDQIVEMKGLPYMEAHAEPYMRQLIASDVVSGPLFIFSGIEKVGNIVHTLKVTRHHGFPVIDEPPLTDAPELCGLVLRSHLLVLLKHRTFTKERGMTGSSIMRKFKAHDFAKAGSGKGINLEDLDISEDEMEMYVDLHPITNGSPYTVLETMSLAKAAVLFRELGLRHLLVVPKTPARPPIVGILTRHDFMPAHVLGLYPHLDPHKQRAD 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1491 781 MobiDBLite consensus disorder prediction 1 30 - -
Lal7g1491 781 CDD ClC_6_like 63 584 - -
Lal7g1491 781 MobiDBLite consensus disorder prediction 1 15 - -
Lal7g1491 781 Gene3D - 585 765 IPR046342 -
Lal7g1491 781 Pfam CBS domain 716 761 IPR000644 -
Lal7g1491 781 Pfam Voltage gated chloride channel 151 565 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lal7g1491 781 SMART cbs_1 715 766 IPR000644 -
Lal7g1491 781 SMART cbs_1 604 657 IPR000644 -
Lal7g1491 781 ProSiteProfiles CBS domain profile. 711 775 IPR000644 -
Lal7g1491 781 PANTHER CHLORIDE CHANNEL PROTEIN CLC-C 28 777 - -
Lal7g1491 781 PRINTS Chloride channel signature 163 180 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lal7g1491 781 PRINTS Chloride channel signature 194 213 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lal7g1491 781 PRINTS Chloride channel signature 258 277 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lal7g1491 781 PRINTS Chloride channel signature 483 503 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lal7g1491 781 PRINTS Chloride channel signature 515 531 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lal7g1491 781 PRINTS Chloride channel signature 533 552 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lal7g1491 781 PRINTS Chloride channel signature 571 585 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lal7g1491 781 CDD CBS_pair_voltage-gated_CLC_euk_bac 596 764 - -
Lal7g1491 781 Gene3D Clc chloride channel 86 584 - -
Lal7g1491 781 SUPERFAMILY Clc chloride channel 72 586 IPR014743 -
Lal7g1491 781 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 28 777 - -
Lal7g1491 781 SUPERFAMILY CBS-domain pair 588 764 IPR046342 -
Lal7g1491 781 PRINTS Plant CLC chloride channel signature 68 76 IPR002251 GO:0005247|GO:0006821|GO:0016020
Lal7g1491 781 PRINTS Plant CLC chloride channel signature 279 287 IPR002251 GO:0005247|GO:0006821|GO:0016020
Lal7g1491 781 PRINTS Plant CLC chloride channel signature 293 303 IPR002251 GO:0005247|GO:0006821|GO:0016020
Lal7g1491 781 PRINTS Plant CLC chloride channel signature 311 318 IPR002251 GO:0005247|GO:0006821|GO:0016020
Lal7g1491 781 PRINTS Plant CLC chloride channel signature 435 451 IPR002251 GO:0005247|GO:0006821|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1491 Lal-Chr7 19625211 19628956 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1491 5 777 Ion Channels AT5G49890 74.775 0.0 1141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1491 K05016 - jre:108988922 1156.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1491 7 19625211 19628956 Lal7g1491 7 19625211 19628956 ECH