Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1490 ATGGAGCTTTCAAATGGAGAAGAGGATCATACTACAAGTTATGTTGATGGGCATGGAGAAACAATGACTTGTTCAAATGGACAAGAGGATCATCATCTTCATGAAGGAGGTGGAACCTACAAGCATCAGAAAGAGGATCATCATCTTCATGAAGGAGGTGGAACCTACAAGCATCAGAAAGTGGTGGTAAGGTACAAAGAATGCCTAAAGAATCATGCAGCTGCAATGGGAGGGAATGTCACTGATGGTTGTGGTGAGTTCATGCCAACTGCTGAAGTTGGCACCATTCAAGCTTTCAACTGCTCTGCTTGCCATTGCCACAGAAACTTCCACAGAAAAGAAGTAGAAGGTGACCCTCCTCATGACTTTTTCAATTTCAGAAGGACTAAATTCCTTCTAGGCCCTCCACGTCATTACAACAACAACAATAATATCCTAGCAGCTCCTCCTCCTGAGGCTTTGATGAGGTACCCTACACCTTCAACGAGTAGTGTACCACACCACATGATAATGCCCTACAACATAGGAGGGCCACTACTTGAAGCTTCAGAATCTGATGAACAAGAAGATGGTGGTGTGGATAGGGCAGCAGCAGCAAAGTTAGTGAAGAAAAGGTACAGGACAAAGTTCAGCCAGGAACAGAAGGAGAAAATGTTGAGCTTTGCAGAGAAGGTTGGATGGAAAATTCAGAAGCAAGAGGAGTCAGTGATGCAACAGTTCTGTCAAGAAATTGGGGTGCAAAGAAGAGTGCTTAAGGTTTGGATGCATAACAATAAGCACAATCTTGCCAAAAAGAATCCTCCTCCTCCTTAA 813 0.4379 MELSNGEEDHTTSYVDGHGETMTCSNGQEDHHLHEGGGTYKHQKEDHHLHEGGGTYKHQKVVVRYKECLKNHAAAMGGNVTDGCGEFMPTAEVGTIQAFNCSACHCHRNFHRKEVEGDPPHDFFNFRRTKFLLGPPRHYNNNNNILAAPPPEALMRYPTPSTSSVPHHMIMPYNIGGPLLEASESDEQEDGGVDRAAAAKLVKKRYRTKFSQEQKEKMLSFAEKVGWKIQKQEESVMQQFCQEIGVQRRVLKVWMHNNKHNLAKKNPPPP 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1490 270 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 65 114 IPR006456 -
Lal7g1490 270 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 64 115 IPR006456 -
Lal7g1490 270 SUPERFAMILY Homeodomain-like 196 264 IPR009057 -
Lal7g1490 270 MobiDBLite consensus disorder prediction 1 47 - -
Lal7g1490 270 MobiDBLite consensus disorder prediction 1 15 - -
Lal7g1490 270 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 41 265 - -
Lal7g1490 270 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 4 41 265 - -
Lal7g1490 270 Pfam ZF-HD protein dimerisation region 63 115 IPR006456 -
Lal7g1490 270 MobiDBLite consensus disorder prediction 25 47 - -
Lal7g1490 270 Gene3D - 188 265 - -
Lal7g1490 270 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 203 259 IPR006455 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1490 Lal-Chr7 19623257 19624069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1490 57 265 ZF-HD Transcription Factor Family AT2G02540 50.673 3.80e-69 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Lal7g1490 ZF-HD_dimer 6.2e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1490 - - gmx:100805652 299.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g2008 14 18985264 18986091 Lal7g1490 7 19623257 19624069 LSH
Lal7g1490 7 19623257 19624069 Lal19g1550 19 17697081 17697923 LSH