Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1489 ATGTCAGAAATGATGATGGATCCAAGCAAGCTGCACTTGAAGAAGGAGCTTACTCAAATTCGAAAAGCAGCTCGTGTGTTGAGAGATCCTGGCACAACCTCTTCTTGGAAGAAATCACCCCTTACTTCCTCTAGATCTGTTGCACTTCCACCTTCTGCATGTAACAACAAGAATACAGGTTCTCAACTTGTTTCTCATTTTTCTGTGAATGAGGAAGACAAGAGTGTGTTCTTGTATAATTGGAAAAACAATGAGCAAGTAGATGTAGATGAAGATGAAGATGGATCTTGGTCACTTTTGGGAGATAGCTTGAGTGATGCTAGAAATGGTTTTGACTCAAAGAGTGACACTTACTTAGGCATCTTCAGATGTGGTGATGCAGCAATCGCAACACCATCATCTGCCATCAAGAAAAAAGAGAGTAAGAAACCCAAACCCCATTCTTCACATTTGGATTTTTTAGACAAATTTCAACAACATTCACAACACACCAGTCTCAATCTAGCTGCTAATATTAGTTCAAGGTCCAAGGCATTGCCTTTTAGTAGGGATAACTCTGTTGACCACTCTGATAATGATACTGAAGAAGATTACTCTAATAATTCTGAGCATGTTACAAGAGTTTTGAGGGCTTCTCCTTTGCTTCTCAAATTCAAGGGTAAAAATTTGTTGAGAAGAAGAAGTAGAAGAAGCACTAAAGAGGACTCTTCTTATTCTTATAGTACTCCTGCATTGTCAACCAGTTCCTACAATAGGTACCCTCACCGTTATCCTAGCACTGTTGGATCCTGGGATGCCACCACAACTTCAATCAACGACGGGGATGATGATGACAATGATGATCATTTGGACTTTCCCGGTCGCCAAGGATGTGGCATTCCTTGCTATTGGTCTAAGAAGACTCCGAAATATCGTGGCTCGTGTGGGAGTTGTTATTCTCCTTCACTTTCAGATACTTTAAGGAGAAAAGGAAGCAGTATACTCTGTGGGAGTCAAAATATTTATCCAAGATACCAAAGATCCTCTTCAGCCTGGCACAAGCGCAGAATTTCCTTGAGGAGTGCTCAAGGTGTTATTCCATTGCTCACCAACAGCGGTGATGTCAGAGGAGGTTCATCCATAGGAACTGGCCATAGTGATGATGAACTTTCTACCAACTTTGGGGAGCTTGATCTTGAGGGCTTGAGCCGACTGGATGGGAGAAGGTGGTCATCAAGTTGTAGGAGTCATGAGGGATTGGAGATTGTTGCTCTCAATGGGGAGGGGGAGGACGAAGGCACACCAGAAAATAGTAGGAGTTTCAGTCAGAAGTATAAGCCTATGTTCTTTGGTGAAGTAGTTGGGCAGAATATTGTGGTTCAGTCACTTATCAATGCTGTTTCGAGGGGACGAATTGCTCCAGTTTATCTTTTTCAAGGTCCGCGCGGGACCGGTAAAACATCAACTGCCAGAATATTTGCTGCTGCCTTGAACTGTGTGTCTCCCGATGAGAGTAAGCCTTGTGGATACTGCAGGGAATGTTCTGATTTCATTTCTGGCAAGAATAGTGATCTACTTGAAGTTGATGGAACCAATAAGAAAGGAATTGATAGAGCTAGATATCTATTGAAAAGATTGCCAATTGGGTCATCATCAGCCTCCTCACGATATACAATTTTTGTCATTGATGAGTGTCACTTGTTACCCTCCAAGACATGGCTGGGATTTCTCAAGTTTCTCGAAGAACCACCTCAGCGGGTTGTGTTCATATTTATAACATCTGATCTTGACAATGTGCCACGGGCAATACAATCTAGATGCCAGAAGTATATTTTTAACAAAATTAAGGATGCAGATATTGTTGCTAGGTTAAGGAAAATATCTGCTCAGGAGAACCTTGATGTTGAAATAGATGCATCGGACCTCATTGCTATGAATGCAGATGGCTCACTTCGAGATGCAGAAACAATATTAGAGCAGCTTAGCTTGCTGGGAAAAAGAATTACTACTTCTCTTGTCAATGAACTTGTGGGAGTTGTTTCAGATGAAAAATTATTGGAACTTTTGGAGTTAGCATTGTCATCAGACACTGCAGAGACAGTGAAAAGAGCCAGGGAATTGATGGACTCTGGAATTGATCCAATGGTTTTAATGTCTCAACTAGCTGGCCTTATTATGGACATCATTGCTGGATCATATACTGTCATTGATGCCAAACATGATGATTCATTCTTTGGTGGTCGCAGATTGAATGAATCAGAGTTGGAGAGGTTAAAACATGCTTTGAAGCTTCTCTCAGAGGCTGAGAAACAGTTAAGGACTTCCAGTGAACGCTCAACATGGTTCACTGCAACTCTGTTGCAGCTTGGTTCTATGCCTTCTCCAGATATTACTCAGTCAGGCAGCAGCAGCAGCAGCAGACAGAGCTGTAAGACAGCTGAAGGTGATCCATCTAGTGCTTCAAGAGACTTTAGTGCTTGCAAGCATAAGTCAGACCTTCAATATATGCCTCGAAACTCAACATCACCCCCTGCGTCCCAGCAAAAAGCACTTAATGGCAATTCCAGCCACCAAAAGGATGTATCCTCAAAGATTGATGGTTTTAGCTTGAAATCGAAACCGTCAAATAACTTGGTCATAGATGATGGCTCCACAATTGTCTCATCTGATGGTCTTATGGTCGGGAATATGATGCTTAGATGCATTGATTCGGGGAAGTTATATGATATATGGGCACGATGTATTGGGAGATGTCACTCTAAGACATTGAGGCAGCTGCTACATGATCATGGAAAGCTTGTGTCCATATGTGATGTTGAAGGTTTTTTGGTAGCATATGTTGCATTTGGGGATGGAGATATTAAACGTAGGGCTGAGAGGTTTTTGAGAAGTATTACAAACTCCATGGAAATGGTTATTAGATGCAATGTGGAGGTCAGAATTATCCACTTGCCAGATGGTGAAGGTGAAAATCAAGTCAATCTACCTGGTCTAAAGCAGGCAGAGCCTACAGTAGCAAATGAGAAGGAACAAAGAGGTCCTATGAGTGGAACAGGGACTCATTCTAGCTTCCCTCCTTTACTGGATGAAAACCTTCAATGTGTTATCGATCCGTCAGATATTCTGACTGAAGGAAATGGTAGTGTGATGGAGAAGAGACAGTATAATCCAATGCAGAGAATTGAATCCATCATTCGTGAGCAGAGACTGGAAACTGCATGGTTACAGGCTGTTGAAAAGGGTTCCCCTGGATCTTTGAATCGTTTGAGACCTGAGAAGAATCAAGTCCTGCCACAAGATGCTATCTATTGTATAGACCAGAAGGAGTCCACCGTGGATTCAATGAGATTTTCCTCTCAGCATCGGGAAGATGACCTGAGTAATGAACTCAAAATTTTGAGTGTTAAGAATGGAAAGTTCCTACAGAAGGATCAGATCTGCAGAAGGGCAGATCGATACCCCATGTCCCCGAGTTTATTGCATGACAGCAGTTTAGCAACAAGTTCTGGCAAAGACAACCTGGGATATGAATCGAGCTCTGGAGCTGGCTGTTGTGGATTTTTATGCTGGAAAAATTTGGAGCCTAGAAGGGTTGTGAAGGTAAAAGGTGGTGGTACCGCTGTTGGAGTTGTACGTAAAGAGGGGCGTTTTACGTTGTTTGGTGAGTGTGGTAAGCCAAAGAAAAAGGACTTGAGAAGATAA 3681 0.4233 MSEMMMDPSKLHLKKELTQIRKAARVLRDPGTTSSWKKSPLTSSRSVALPPSACNNKNTGSQLVSHFSVNEEDKSVFLYNWKNNEQVDVDEDEDGSWSLLGDSLSDARNGFDSKSDTYLGIFRCGDAAIATPSSAIKKKESKKPKPHSSHLDFLDKFQQHSQHTSLNLAANISSRSKALPFSRDNSVDHSDNDTEEDYSNNSEHVTRVLRASPLLLKFKGKNLLRRRSRRSTKEDSSYSYSTPALSTSSYNRYPHRYPSTVGSWDATTTSINDGDDDDNDDHLDFPGRQGCGIPCYWSKKTPKYRGSCGSCYSPSLSDTLRRKGSSILCGSQNIYPRYQRSSSAWHKRRISLRSAQGVIPLLTNSGDVRGGSSIGTGHSDDELSTNFGELDLEGLSRLDGRRWSSSCRSHEGLEIVALNGEGEDEGTPENSRSFSQKYKPMFFGEVVGQNIVVQSLINAVSRGRIAPVYLFQGPRGTGKTSTARIFAAALNCVSPDESKPCGYCRECSDFISGKNSDLLEVDGTNKKGIDRARYLLKRLPIGSSSASSRYTIFVIDECHLLPSKTWLGFLKFLEEPPQRVVFIFITSDLDNVPRAIQSRCQKYIFNKIKDADIVARLRKISAQENLDVEIDASDLIAMNADGSLRDAETILEQLSLLGKRITTSLVNELVGVVSDEKLLELLELALSSDTAETVKRARELMDSGIDPMVLMSQLAGLIMDIIAGSYTVIDAKHDDSFFGGRRLNESELERLKHALKLLSEAEKQLRTSSERSTWFTATLLQLGSMPSPDITQSGSSSSSRQSCKTAEGDPSSASRDFSACKHKSDLQYMPRNSTSPPASQQKALNGNSSHQKDVSSKIDGFSLKSKPSNNLVIDDGSTIVSSDGLMVGNMMLRCIDSGKLYDIWARCIGRCHSKTLRQLLHDHGKLVSICDVEGFLVAYVAFGDGDIKRRAERFLRSITNSMEMVIRCNVEVRIIHLPDGEGENQVNLPGLKQAEPTVANEKEQRGPMSGTGTHSSFPPLLDENLQCVIDPSDILTEGNGSVMEKRQYNPMQRIESIIREQRLETAWLQAVEKGSPGSLNRLRPEKNQVLPQDAIYCIDQKESTVDSMRFSSQHREDDLSNELKILSVKNGKFLQKDQICRRADRYPMSPSLLHDSSLATSSGKDNLGYESSSGAGCCGFLCWKNLEPRRVVKVKGGGTAVGVVRKEGRFTLFGECGKPKKKDLRR 1226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1489 1226 MobiDBLite consensus disorder prediction 225 251 - -
Lal7g1489 1226 MobiDBLite consensus disorder prediction 28 54 - -
Lal7g1489 1226 CDD AAA 447 605 - -
Lal7g1489 1226 MobiDBLite consensus disorder prediction 179 204 - -
Lal7g1489 1226 SUPERFAMILY post-AAA+ oligomerization domain-like 679 780 IPR008921 GO:0003677|GO:0006260
Lal7g1489 1226 Gene3D - 672 786 - -
Lal7g1489 1226 Gene3D - 425 606 IPR027417 -
Lal7g1489 1226 PANTHER PROTEIN STICHEL-LIKE 1 172 1163 - -
Lal7g1489 1226 Coils Coil 744 771 - -
Lal7g1489 1226 Gene3D - 609 671 - -
Lal7g1489 1226 MobiDBLite consensus disorder prediction 182 203 - -
Lal7g1489 1226 MobiDBLite consensus disorder prediction 997 1017 - -
Lal7g1489 1226 TIGRFAM dnaX_nterm: DNA polymerase III, subunit gamma and tau 433 782 IPR012763 GO:0003887|GO:0005524|GO:0006260|GO:0009360
Lal7g1489 1226 MobiDBLite consensus disorder prediction 785 861 - -
Lal7g1489 1226 MobiDBLite consensus disorder prediction 785 812 - -
Lal7g1489 1226 Pfam DNA polymerase III, delta subunit 448 608 - -
Lal7g1489 1226 MobiDBLite consensus disorder prediction 235 251 - -
Lal7g1489 1226 CDD HLD_clamp_pol_III_gamma_tau 608 671 IPR045085 -
Lal7g1489 1226 MobiDBLite consensus disorder prediction 32 54 - -
Lal7g1489 1226 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 435 658 IPR027417 -
Lal7g1489 1226 MobiDBLite consensus disorder prediction 827 861 - -
Lal7g1489 1226 Pfam DNA polymerase III subunits gamma and tau domain III 662 782 IPR022754 GO:0003887
Lal7g1489 1226 SMART AAA_5 465 627 IPR003593 -
Lal7g1489 1226 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 172 1163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1489 Lal-Chr7 19611523 19618559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1489 429 723 Core DNA Replication Machinery Family AT1G21690 25.000 7.33e-14 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1489 - - gmx:100814391 1702.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g2006 14 18962640 18975309 Lal7g1489 7 19611523 19618559 LSH