Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1488 ATGGCAATTGAAGCTGTTAACTCATCATCAATATCACCAACCATGAGTCTGAGCAATAGCCATAGTCAGGATGAAGGGGTAACCATGAATAACGAGGTTGAGAACAATACAAGAAATCAACAACAACAACAACAAGATAATAACAATGATGGTGATGATCATGAACATGACATGGTGATGCCAGGGTTTCGGTTCCACCCAACTGAAGAAGAGTTAGTTGAGTTCTACCTTCGCCGTAAGGTGGAGGGCAAGCGCTTTAATGTTGAGCTTATTACTTTCCTTGATCTTTATCGCTATGACCCTTGGGAGCTTCCTGCGATGGCAGCAATTGGAGAGAAGGAGTGGTACTTTTATGTGCCAAGGGATAGGAAATACAGAAACGGAGATAGACCAAACCGTGTAACAACATCTGGATATTGGAAAGCAACCGGAGCTGATAGGATGATCCGAACTGACAATTTTAGATCAATAGGGTTGAAGAAAACCCTAGTTTTCTATTCTGGCAAAGCTCCTAAAGGCATCCGAACCAGTTGGATTATGAATGAGTACCGTTTGCCTCATCATGATACTCAACGTTATCAAAAGGCTGAGATATCGCTTTGCCGAGTGTACAAGAGAGCAGGAGTAGAAGACCATCACTCACTCCCTCTTGCTCTCCCAACCCGGCCATCTTCATCATCTTCAAGATCAGATCATCACAATAATACTAATACTAAGAAGAACGATAATATTAATGTTGAAATGATTCACCATCAGAATATGGGATCATCAATATTTGTGGGAGAATCAACAAAGCCAATTATTGAAACGGATGGTATTGGCAGCAAAAGCATTACTACTAGCACTGGTTTGGATCATCATCATGACGTGTCTACTGCACTTGGGCTGTCCAAGCACAATTCTTACCACCACCGTGCTGGTCCAACAATAATGGACCATCAGGCAGAGGAGGAACAAGGGTTGATGATGAATATGATGATGCAGCAGCAGCAACAACAGCAACAGCAACAGCAACATCACTCTAAGCCATTATCCTCCTCTTTAGTCCCAACATTCTTCCCTTCTTCTTCTTCCAACAACAATAATGCAGTAGCAACCATTGATGATCTGAATAGGCTACTAACTTATCAACAACAGCAGCAGTACTACAATAACAATCATTTGTCTACTTTGCTGATGCAACCACCGCCAAATTCACTTCCAACCACTTTCTCTGATCACCGATCAGTTTGGGAATGGAATCCGTTCCCCGATCAGCCCAACCGCGACTACAACAACTTGTTCTTCAAGTAA 1293 0.4246 MAIEAVNSSSISPTMSLSNSHSQDEGVTMNNEVENNTRNQQQQQQDNNNDGDDHEHDMVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPAMAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRTDNFRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPHHDTQRYQKAEISLCRVYKRAGVEDHHSLPLALPTRPSSSSSRSDHHNNTNTKKNDNINVEMIHHQNMGSSIFVGESTKPIIETDGIGSKSITTSTGLDHHHDVSTALGLSKHNSYHHRAGPTIMDHQAEEEQGLMMNMMMQQQQQQQQQQQHHSKPLSSSLVPTFFPSSSSNNNNAVATIDDLNRLLTYQQQQQYYNNNHLSTLLMQPPPNSLPTTFSDHRSVWEWNPFPDQPNRDYNNLFFK 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1488 430 MobiDBLite consensus disorder prediction 327 360 - -
Lal7g1488 430 SUPERFAMILY NAC domain 59 205 IPR036093 GO:0003677|GO:0006355
Lal7g1488 430 MobiDBLite consensus disorder prediction 214 243 - -
Lal7g1488 430 MobiDBLite consensus disorder prediction 1 47 - -
Lal7g1488 430 PANTHER NAC DOMAIN-CONTAINING PROTEIN 72-LIKE 34 383 - -
Lal7g1488 430 Gene3D NAC domain 68 209 IPR036093 GO:0003677|GO:0006355
Lal7g1488 430 MobiDBLite consensus disorder prediction 1 60 - -
Lal7g1488 430 Pfam No apical meristem (NAM) protein 61 185 IPR003441 GO:0003677|GO:0006355
Lal7g1488 430 ProSiteProfiles NAC domain profile. 59 206 IPR003441 GO:0003677|GO:0006355
Lal7g1488 430 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 34 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1488 Lal-Chr7 19602959 19605756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1488 27 229 NAC Transcription Factor Family AT2G02450 74.886 3.55e-113 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal7g1488 NAM 2e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1488 - - gmx:100792622 433.721