Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1451 ATGGTTTCAATGGTTGCCAGTGGTAGCTGTCAAATGTCTCCTTCAGTTATCCAAGAAAAAGGAAGTAGGAATAAGAGAAAATTCCGAGCTGATCCATCTTTAGGGGAGCCAGATAAGGTTATTCCTGCAACTCAACATGAGTGCCTCAGTTATGAATTCTCTGCCGAGAAGTTTGAAATAAGCACAGGTCATGTGCAAGCCACTGCTTGTGACCTGTGTAGTGTTAACCATGATCATTCTGATGGGTTGAAGCTTGACCTTGGATTGTATAGTCTTGGAAGCTCATCTGAGTTCGGGCCTTGCCAACCTAAGGAAGAAGTCGAGGTAGATGAATATGATGATGCTGATTGGAGTGATCTCACGGAAGCCCAACTGGAAGAGCTAGTCTTGAGTAATTTGGATGCCATTTTCAAGAGTGCAATTAGAGAAATTGTTGCATGTGGCTACACTCAAGAAGTTGCTAGTAAGGCAGTCTTAAGGTCTGGCATCTGTTATGGATGCAAAGATACTGTGTCTAATATAGTTGATAACACTTTGGCACTTCTTAGGAAAGGGCAAGAAGTTGATCCTTCACAAGAGCACTATTTTGAAGATTTAGTGCAACTTGAGAAGTACATCTTGGCTGAATTGGTCTGTGTTCTTCGAGAGGTTAGGCCTTTCTTCAGTACAGGGGATGCAATGTGGTGTTTGTTAATTTGTGATTTGAATGTGTCAGATGCTTGTGCAATGGACAGTGACTCTTTAATTAGTTTAGGTAGTGACGGAATTGCTGATAGTTGTTCATCTAACCAAATGGAGTTACAGTCAAAAGCAGAAGCAAAAGTTCCTGAATTTAGTCTTCCAAGTCCTTGTAAATCAATTCCTGCTGTTTCTCATAATTCTCAATCGAAGAAATCCCTTGTGGCAGGAATTCCTGGTATGAACAACTTAAAGAACTCTCAAACTATTGGTGGAGCCTCGGAGAATGATGGTGCTAGTTGTGGACCTGTTTGTGTTGATAAAGCATTTAGTGCTACAGGAACATGTCAATCTGAAGAAAAGCATGGAAATGTTAGGAAGGTCCATTCTGGTAGCAGTAAGAGGGACTACATTCTTCGGCAGAAATCATTTCATGCGGAAAAAAGTTATCGGACTTATGGATCTAAAGGGTCTTCAAGAGGAGGAAAGCTGAGTGGCTTAAGTGGTGTAATCATGGATAATAAACTTAAATCTGTGTCAGAATCTTCTACCATCAACTTGAAGAGTGCATCCTTACAGATAAGTAAGGCTGTGGGAGTTGAAGTGACTCAAGACAATCTTGACACCAGTTTCTCACCTAATGCTAGACCATCTGCCCCTGCTGCATTTAGCCTGGACTCTGCTGATGCTGTTTTTAGATCAATCAATACTTCATATTCAGTACATGCAGAAAATACAAAACCTGCATTCAGTAGCCCCGGTTCATTATCAACCACAGATACCGATCTTTCTCTTTCACTGTCTTCAAAAACCAAGTTGTCTATGGCACCTGTCTGCTGCAATAATGAGGCACCTAATAGTAGTCGTGTGGGGATACCGTATGACAAGTCCCTAGGGCAGTGGGTACCCCAGGATAGAAAGGATGAGATGATTTTGAAGCTGGTTCCAAGGGTCCGGGAGCTACAAAATCTGCTTCAAGAATGGACCGAGTGGGCCAATCACAAAGTAATGCAGGCTGCTCGTCGTCTGGGTAAGGATAAGGCTGAGCTTAAGACACTAAGGAAAGAAAAAGAGGAAGTTGAGCGTCTTAAGAAAGAGAAGCAGTCTCTTGAGGAAAACACCATAAAAAAGCTTTCTGAGATGGAAAATGCCTTGTGTAAGGCTGGTGGGCAAGTAGAGCGGGCTAATGCTGCAGTCAGGAAGCTTGAGGGGGAGAATGCTGCACTGAGGAGAGAGATGGATGCTGCTAAGCTACGAGCTGCAGAAACTGCCGCAAACTGTCAAGAGGTCTCAAGGAGAGAAAAGAAAACTCAATTGCAGTTTCAGTCATGGGAAAAGCAGAAGTTCTTGCTTCAGGAAGAGTTAATGAGTGAAAAACGCAAATTGGCACGGCTGCTGCAGGAATCAGACCAAGCTAAAATGCAACAGGGGCAAATTGAGGCTAGATGGCAGCAGGAGGCAAAGGCAAAAGAAGTACTTCTCTTACAGGCCAATTCTATAAGGAAAGAAAAAGAACAAATTGAGGAGTTAGGGAAATCCAAGGGGGATATGATGAAATCGAAGGCAGAGAGGAATCTGCAAAGGTACAGAGATGATATCCATAAACTTGAAAAAGAAATTGCAGAACTGAGACTGAAGAGTGAATCTTCGAAGATTGCTGCACTGAGGATGGGCATTGATGGAAGGTATGCCAGCAGATTGGCTGACACGAAAAATGGCAATGCTGTAGAGAAGTGGCGAGATTCTTTCATTTCGGAAATAGCAAGTGATGACACAGTAACCGGCGGTGTGAAACGAGAAAGGGAATGTGTGATGTGCCTTTCTGAGGAGATGTCAGTTGTATTCCTGCCATGTGCTCATCAGGTTGTTTGCATAACATGCAATGAGCTCCATGAGAAACAAGGTATGCAAGATTGTCCTTCTTGCAGGACCCCTATCCAGCACCGTATTCATGCCCGTTATACTACCCTTAGTTAA 2655 0.4309 MVSMVASGSCQMSPSVIQEKGSRNKRKFRADPSLGEPDKVIPATQHECLSYEFSAEKFEISTGHVQATACDLCSVNHDHSDGLKLDLGLYSLGSSSEFGPCQPKEEVEVDEYDDADWSDLTEAQLEELVLSNLDAIFKSAIREIVACGYTQEVASKAVLRSGICYGCKDTVSNIVDNTLALLRKGQEVDPSQEHYFEDLVQLEKYILAELVCVLREVRPFFSTGDAMWCLLICDLNVSDACAMDSDSLISLGSDGIADSCSSNQMELQSKAEAKVPEFSLPSPCKSIPAVSHNSQSKKSLVAGIPGMNNLKNSQTIGGASENDGASCGPVCVDKAFSATGTCQSEEKHGNVRKVHSGSSKRDYILRQKSFHAEKSYRTYGSKGSSRGGKLSGLSGVIMDNKLKSVSESSTINLKSASLQISKAVGVEVTQDNLDTSFSPNARPSAPAAFSLDSADAVFRSINTSYSVHAENTKPAFSSPGSLSTTDTDLSLSLSSKTKLSMAPVCCNNEAPNSSRVGIPYDKSLGQWVPQDRKDEMILKLVPRVRELQNLLQEWTEWANHKVMQAARRLGKDKAELKTLRKEKEEVERLKKEKQSLEENTIKKLSEMENALCKAGGQVERANAAVRKLEGENAALRREMDAAKLRAAETAANCQEVSRREKKTQLQFQSWEKQKFLLQEELMSEKRKLARLLQESDQAKMQQGQIEARWQQEAKAKEVLLLQANSIRKEKEQIEELGKSKGDMMKSKAERNLQRYRDDIHKLEKEIAELRLKSESSKIAALRMGIDGRYASRLADTKNGNAVEKWRDSFISEIASDDTVTGGVKRERECVMCLSEEMSVVFLPCAHQVVCITCNELHEKQGMQDCPSCRTPIQHRIHARYTTLS 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1451 884 ProSiteProfiles Zinc finger RING-type profile. 829 869 IPR001841 -
Lal7g1451 884 Pfam Zinc finger, C3HC4 type (RING finger) 826 874 - -
Lal7g1451 884 Coils Coil 618 652 - -
Lal7g1451 884 Coils Coil 716 736 - -
Lal7g1451 884 MobiDBLite consensus disorder prediction 20 34 - -
Lal7g1451 884 PANTHER OS05G0141500 PROTEIN 5 881 IPR046934 -
Lal7g1451 884 MobiDBLite consensus disorder prediction 1 19 - -
Lal7g1451 884 Coils Coil 674 701 - -
Lal7g1451 884 Coils Coil 745 779 - -
Lal7g1451 884 MobiDBLite consensus disorder prediction 1 36 - -
Lal7g1451 884 PANTHER OS05G0141500 PROTEIN 5 881 - -
Lal7g1451 884 Pfam Family of unknown function (DUF6592) 132 243 IPR046527 -
Lal7g1451 884 Coils Coil 562 606 - -
Lal7g1451 884 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 816 879 IPR013083 -
Lal7g1451 884 SUPERFAMILY RING/U-box 828 875 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1451 Lal-Chr7 19349785 19354084 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1451 - - gsj:114420104 1161.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1451 7 19349785 19354084 Lal7g1451 7 19349785 19354084 ECH
Lal14g1957 14 18689822 18694114 Lal7g1451 7 19349785 19354084 LSH
Lal7g1451 7 19349785 19354084 Lal19g1518 19 17487252 17491443 LSH
Lal7g1451 7 19349785 19354084 Lal3g0323 3 2105368 2108291 PCT
Lal3g0323 3 2105368 2108291 Lal7g1451 7 19349785 19354084 PCT