Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1432 ATGATGGAAAGAAGGAGGGAGAGAGATATAATGTGGAATTCGATTCGAGGTGGTAGTTGTCCAATATGTTTGTTGGATTTAGAACCTCGTTTCAAACAAGTTGTGGTTCTATCGCGTTGTTACCACGCTTACTGCACTCACTGTATTGCGCGTTGGAGTCAGCTCCGTAGAATTTGCCCTCTTTGCAATTCACACTTCAATTCTTGGTTCTCAATCCTCAACCTTTCTTCCACTCCCTTCCGCAAACACTTCTTGCCACCACTCCCTTCTACCCAATCACGCCTTCCCACTCCCACAAGAATTGTTGGTAGAAGAAGAAGGGTTGATAGGAGGGCATTGCAATGGCGAAGATCATTTGGTAATCCTGCTTTTGTCACTACACATGTTATTGCTCAGAGGAAAATAGAATGGCGTGCTAGCGTATACAACAATATTGGATTGCAACCTGATCCCACAACCCTAAGGTGTCTTGAGGCAAGATGCAAGGGCTGCAGTCCGTGCAGATTGTTCGTTTTCATGCTACAACAACACCCCTCTCCGAATAAATCCAGAAAAGATGCTTTAAAAAATGAAATTATACAGCGGATTGAGCCATGGATAAGGAGGGAGCTACAAGCTGTCCTTGGGGACCCAGATCCTACTGTCATTGTTCATGTGGTGACCTCACAATTCATTGCTTGGCTAGAAGAGAAAGCTAGAATGCCATCTGGGCAGTGTGATATTGGAGATGGCTTCATTCATCCTCTACGTCCTTTCCTGCGTGATAAAGCCAGTACCTTCTGGCATGAACTAAGGTGCTGA 801 0.4507 MMERRRERDIMWNSIRGGSCPICLLDLEPRFKQVVVLSRCYHAYCTHCIARWSQLRRICPLCNSHFNSWFSILNLSSTPFRKHFLPPLPSTQSRLPTPTRIVGRRRRVDRRALQWRRSFGNPAFVTTHVIAQRKIEWRASVYNNIGLQPDPTTLRCLEARCKGCSPCRLFVFMLQQHPSPNKSRKDALKNEIIQRIEPWIRRELQAVLGDPDPTVIVHVVTSQFIAWLEEKARMPSGQCDIGDGFIHPLRPFLRDKASTFWHELRC 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1432 266 Pfam Ring finger domain 19 63 IPR001841 -
Lal7g1432 266 SMART ring_2 20 62 IPR001841 -
Lal7g1432 266 ProSiteProfiles Zinc finger RING-type profile. 20 63 IPR001841 -
Lal7g1432 266 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 16 76 IPR013083 -
Lal7g1432 266 PANTHER TOPOISOMERASE I-BINDING, ARGININE/SERINE-RICH A-RELATED 16 266 - -
Lal7g1432 266 ProSitePatterns Zinc finger RING-type signature. 40 49 IPR017907 -
Lal7g1432 266 SUPERFAMILY RING/U-box 15 74 - -
Lal7g1432 266 PANTHER E3 UBIQUITIN-PROTEIN LIGASE TOPORS 16 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1432 Lal-Chr7 19244949 19250821 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1432 11 264 C3H Transcription Factor Family AT2G39100 39.700 5.23e-55 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1432 - - adu:107464375 315.849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1432 7 19244949 19250821 Lal7g1432 7 19244949 19250821 ECH