Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1426 ATGGTGGACAACGTTGTTGGGAGTTGCTCAAATGACGATGTTGGAGGGATCAAGGAACAAGATAGGTTGCTGCCAATAGCGAATGTTGGTCGGATAATGAAGCAGATATTGCCTCAGAATGCAAAAATCTCGAAGGAAGCGAAAGAAACAATGCAAGAATGCGTGTCAGAGTTCATAGGGTTTGTAACAAGTGAGGCATCAGAGAGATGCAGAAAAGAAAGGAGAAAGACTGTGAATGGAGATGATATATGCTGGGCCTTAGGGACACTTGGTTTTGATGATTATGCTGAACCAATGAGAAGGTACTTGCATAGATATAGAGAGTTAGAGGTTGATAGAACCATTAATCAAGAAAGAGGAAATAGCCCTGAAAGACAAGGCTAA 384 0.4167 MVDNVVGSCSNDDVGGIKEQDRLLPIANVGRIMKQILPQNAKISKEAKETMQECVSEFIGFVTSEASERCRKERRKTVNGDDICWALGTLGFDDYAEPMRRYLHRYRELEVDRTINQERGNSPERQG 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1426 127 Gene3D Histone, subunit A 13 127 IPR009072 GO:0046982
Lal7g1426 127 PRINTS CCAAT-binding transcription factor subunit A signature 51 69 - -
Lal7g1426 127 PRINTS CCAAT-binding transcription factor subunit A signature 70 88 - -
Lal7g1426 127 PRINTS CCAAT-binding transcription factor subunit A signature 89 107 - -
Lal7g1426 127 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 23 87 IPR003958 -
Lal7g1426 127 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y PROTEIN 1 121 - -
Lal7g1426 127 SUPERFAMILY Histone-fold 20 114 IPR009072 GO:0046982
Lal7g1426 127 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 121 IPR027113 GO:0001228|GO:0006355|GO:0016602
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1426 Lal-Chr7 19195729 19196112 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1426 17 120 CCAAT-HAP3 Transcription Factor Family AT2G47810 73.077 3.60e-56 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Lal7g1426 CBFD_NFYB_HMF 3.5e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1426 K08065 - gmx:100786046 205.682
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1426 7 19195729 19196112 Lal7g1426 7 19195729 19196112 ECH