Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1425 ATGTCTCTCATTTTCAACTCTCAACGTCTCAGATCCCTTCTCAACCTATCACGCTCATCACTATTCTCTCTCACTCCCAATTTCTTCTCAACAGCTTCCAAAGAAAATCCTTTCACCGTTTCATACCTCATAAACAAATGTTCCTTCCCACTAGAAACCGCTCTCAAAGCATCCAAACGGGTTCATTTCGATAACCCTAAAAAACCAGATTCAGTCATCGCCTTCTTCAAAACCCAGGGTTTCACCGATGCCCAGATACAAAGCGTTATGCGCAGGGCACCAGAGCTTCTCATATGCGATCACACCAAAAGGGTATTGCCAAAGTTTCAATTTTTAACATCAAAAGGTGCTTCCCCTTCTGATATTGTTATCACTGTGTCTCGTAACCCTGATTTTCTTCGTAAGAGCCTTGACAATCATATCATCCCTGCTTTTCAATTTGTAAGACGATTCTGCCCTTCTGATCAGAGAGCAATTGCCTGTGTTATTGCTTGTCCTACTTCAATTTCTGATGCACGTGTTCAACAGAATGTTCAGTTGTTGATTGATGAAGGCGTCACAGACTCAAATATTTATAATTTGTTTCGTACTAGGCTTACTGTACTATGCTCTCATGATTTTGGAGAAGTATTGGATGAGGTTAAAAACATGGGTTTTGATCCTTCCAAGTCAGGTTTTAGCATTGCGATATTGGCCAAAAAGGCTATTACTAAATCTAAGTGGGATGCTAAAATTGATGCCTTTAAGACATGGGGTTGGTCTGAACAAGAAGTTTTAGAAGCTTTTAAGAGGTTGCCGCAGTTTATGCTTCGGTCTCAGGATAAACTCAATGCAGTGATTAGTCTTTGGGTCGGTCAGCTCGGTTGGGATCCTTCGGCTCTTCTCAAAGCCCCAGTGATTTTTGGATATAGCTTGGAGAAAAGGCTTATTCCAAGGGCCTCTGTTGTCAAGGAACTTCTCTCCAAAGGTTTGATGAGAAAGGATGCTAGCTTGGTTACACCTTTTGGTTTATCTGAGCATATGTTCTTGGAGAAATTTGTGAGATGCTTTGATGAGGACAATGCATCTCGTCTATTAAAGCTCTACCAGAAAGAACTTCAGCACCTGTCAGTTAGTTAA 1119 0.412 MSLIFNSQRLRSLLNLSRSSLFSLTPNFFSTASKENPFTVSYLINKCSFPLETALKASKRVHFDNPKKPDSVIAFFKTQGFTDAQIQSVMRRAPELLICDHTKRVLPKFQFLTSKGASPSDIVITVSRNPDFLRKSLDNHIIPAFQFVRRFCPSDQRAIACVIACPTSISDARVQQNVQLLIDEGVTDSNIYNLFRTRLTVLCSHDFGEVLDEVKNMGFDPSKSGFSIAILAKKAITKSKWDAKIDAFKTWGWSEQEVLEAFKRLPQFMLRSQDKLNAVISLWVGQLGWDPSALLKAPVIFGYSLEKRLIPRASVVKELLSKGLMRKDASLVTPFGLSEHMFLEKFVRCFDEDNASRLLKLYQKELQHLSVS 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1425 372 SMART mt_12 87 118 IPR003690 GO:0003690|GO:0006355
Lal7g1425 372 SMART mt_12 259 290 IPR003690 GO:0003690|GO:0006355
Lal7g1425 372 SMART mt_12 291 325 IPR003690 GO:0003690|GO:0006355
Lal7g1425 372 SMART mt_12 123 154 IPR003690 GO:0003690|GO:0006355
Lal7g1425 372 Pfam mTERF 74 202 IPR003690 GO:0003690|GO:0006355
Lal7g1425 372 Pfam mTERF 238 342 IPR003690 GO:0003690|GO:0006355
Lal7g1425 372 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 21 367 - -
Lal7g1425 372 Gene3D Transcription termination factor 3, mitochondrial 167 354 IPR038538 -
Lal7g1425 372 PANTHER CGI-12 PROTEIN-RELATED 21 367 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1425 Lal-Chr7 19185894 19187012 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lal7g1425 mTERF 2.1e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1425 K15032 - gmx:102666622 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1425 7 19185894 19187012 Lal7g1425 7 19185894 19187012 ECH
Lal7g1425 7 19185894 19187012 Lal19g1501 19 17387226 17388380 LSH