Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1410 ATGGGGGACAAGTCTGAAGTTTTGGAGGCTGTGTTGAAGGAAGCTGTGGATTTGGAAAACATACCCATTGAGGAGGTTTTTGAGAATCTGAGATGTAGCAAAGAAGGACTTACCAGTCAGGCTGCTGAGGAGAGATTGGTCATTTTTGGCCACAACAAGCTTGAAGAGAAAAGGGAGAGCAAATTTTTGAAGTTCTTAGGATTTATGTGGAATCCTCTGTCATGGGTTATGGAGGCGGCTGCTATAATGGCTATTGCACTTGCAAATGGAGGGGGGAAACCTCCTGATTGGCAAGACTTTGTGGGTATCATCACCTTGCTTATTATCAATTCAACTATTAGTTTCATAGAGGAGAACAATGCTGGTAATGCTGCAGCTGCTCTCATGGCTCGTCTTGCTCCAAAAGCAAAGTCTGCACTTACAGGCGAGTCCCTGCCAGTGACAAAGAGCCCCGGTGACGGTGTGTACTCTGGTTCTACCTGCAAACAAGGAGAGATTGAAGCTATAGTCATTGCTACTGGTGTTCACACCTTCTTTGGGAAAGCTGCTCACCTTGTGGATTCTACTAATCAAGTTGGTCACTTTCAAAAGGCACGTGCTGGTATACGAGAAATACATTTTCTTCCTTTCAATCCAACTGATAAGCGGACAGCATTGACTTATATTGATAGTGATGGTAAAATGCATAGAGTAAGCAAAGGTGCACCAGAGCAGATCCTCAATCTTGCCCACAATAAGGTCGACATTGAACGTAGAGTTCATGCAGTGATTGATAAGTTTGCAGAGCGTGGTTTGCGTTCTCTTGCTGTAGCGTACCAGGAAGTTCCAGATGGAAGGAAAGAGAGTGGTGGAGGCCCATGGCAGTTTATTGGCCTTTTGCCTCTGTTTGACCCACCTAGGCATGATAGTGCAGAAACAATACGGAGAGCACTGAACCTTGGAGTTAATGTCAAAATGATTACAGGGGATCAACTAGCTATCGGAAAGGAAACAGGCCGTCGTTTGGGAATGGGTACCAATATGTATCCTTCATCTGCTTTACTTGGGCAGGATAAGGATGAATCCATTGCAGCCTTGCCAGTAGATGAACTGATAGAAAAAGCTGATGGATTCGCTGGTGTTTTCCCTGAGCACAAGTATGAGATTGTGAAACGCTTGCAAGCCAAGAAACATATATGTGGAATGACTGGTGATGGTGTGAATGATGCACCTGCACTCAAGAAGGCAGACATTGGTATAGCTGTCGCTGATGCCACTGATGCAGCTCGTAGTGCATCTGATATTGTTTTAACAGAGCCTGGTCTTAGTGTGATTATAAGTGCTGTTTTGACCAGCCGAGCTATCTTCCAGAGAATGAAAAATTATACAATTTATGCAGTCTCAATTACAATTCGTATTGTGCTTGGTTTCATGTTGCTGGCTCTAATATGGAAGTTTGATTTTCCACCTTTTATGGTGCTCATTATCGCCATCCTAAATGATGGTACTATTATGACAATATCTAAAGATCGAGTAAAACCATCACCTCTGCCAGATAGCTGGAAGCTAGCTGAGATATTTACTACTGGAGTTGTGCTTGGAAGTTACTTAGCAATGATGACAGTCATATTCTTTTGGGCAGCATACAAAACAGATTTCTTTCCGAGAGTGTTCAGGGTCTCGAGTCTTCAAAAAACTGCCCATGATGATTTCCGTAAACTTGCCTCCGCAATCTATCTTCAAGTGAGCACAATTAGTCAGGCTCTTATATTTGTAACTCGGTCTCGAGGTTGGTCATATGTTGAGCGTCCTGGTTTATTGCTGGTGTTTGCCTTTCTTGTTGCTCAGCTGATTGCCACTTTGATTGCTGTATATGCAAGCTGGAGCTTCGCTGCTATCGAAGGAATAGGTTGGGGCTGGGCTGGTGTAATATGGTTATATAACATAGTATTCTACATCCCACTTGATGTCATTAAGTTTATGATTCGCTACACATTGAGTGGGAGAGCTTGGGACCTTGTCATTGAGCAAAGGATTGCATTCACAAGGCAAAAGGACTTCGGCAAGGAACAAAGGGAACTTCAATGGGCACATGCACAAAGAACATTGCATGGATTACAACCACCTGACTCCAAGTTCACCGAGCGCACACATGTTAGCGAACTCAATCAAATGGCTGAAGAAGCTAAAAGAAGAGCCGAAATCGCAAGGTTGAGAGAACTTCATACACTCAAAGGTCATGTTGAATCTGTTGTGAGATTGAAGGGACTTGACATTGATACAATTCAGCAAGCATACACTGTGTGA 2286 0.4348 MGDKSEVLEAVLKEAVDLENIPIEEVFENLRCSKEGLTSQAAEERLVIFGHNKLEEKRESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLIINSTISFIEENNAGNAAAALMARLAPKAKSALTGESLPVTKSPGDGVYSGSTCKQGEIEAIVIATGVHTFFGKAAHLVDSTNQVGHFQKARAGIREIHFLPFNPTDKRTALTYIDSDGKMHRVSKGAPEQILNLAHNKVDIERRVHAVIDKFAERGLRSLAVAYQEVPDGRKESGGGPWQFIGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPVDELIEKADGFAGVFPEHKYEIVKRLQAKKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVVLGSYLAMMTVIFFWAAYKTDFFPRVFRVSSLQKTAHDDFRKLASAIYLQVSTISQALIFVTRSRGWSYVERPGLLLVFAFLVAQLIATLIAVYASWSFAAIEGIGWGWAGVIWLYNIVFYIPLDVIKFMIRYTLSGRAWDLVIEQRIAFTRQKDFGKEQRELQWAHAQRTLHGLQPPDSKFTERTHVSELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIDTIQQAYTV 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1410 761 Gene3D - 398 658 - -
Lal7g1410 761 Gene3D - 68 143 - -
Lal7g1410 761 Gene3D - 166 296 IPR023299 GO:0000166
Lal7g1410 761 SUPERFAMILY HAD-like 288 442 IPR036412 -
Lal7g1410 761 PANTHER CALCIUM-TRANSPORTING ATPASE 3 137 - -
Lal7g1410 761 PANTHER CALCIUM-TRANSPORTING ATPASE 137 197 - -
Lal7g1410 761 PANTHER CALCIUM-TRANSPORTING ATPASE 197 741 - -
Lal7g1410 761 Coils Coil 712 732 - -
Lal7g1410 761 SUPERFAMILY Calcium ATPase, transduction domain A 137 186 IPR008250 -
Lal7g1410 761 SUPERFAMILY Calcium ATPase, transmembrane domain M 17 659 IPR023298 -
Lal7g1410 761 Pfam haloacid dehalogenase-like hydrolase 226 410 - -
Lal7g1410 761 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 371 484 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal7g1410 761 Pfam Cation transporter/ATPase, N-terminus 20 83 IPR004014 -
Lal7g1410 761 PRINTS H+-transporting ATPase (proton pump) signature 253 271 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal7g1410 761 PRINTS H+-transporting ATPase (proton pump) signature 368 384 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal7g1410 761 PRINTS H+-transporting ATPase (proton pump) signature 396 412 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal7g1410 761 PRINTS H+-transporting ATPase (proton pump) signature 427 452 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal7g1410 761 PRINTS H+-transporting ATPase (proton pump) signature 572 593 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal7g1410 761 SMART Cation_ATPase_N_a_2 17 89 IPR004014 -
Lal7g1410 761 PANTHER PLASMA MEMBRANE ATPASE 1 3 137 - -
Lal7g1410 761 PANTHER PLASMA MEMBRANE ATPASE 1 137 197 - -
Lal7g1410 761 PANTHER PLASMA MEMBRANE ATPASE 1 197 741 - -
Lal7g1410 761 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 192 302 IPR023299 GO:0000166
Lal7g1410 761 Pfam E1-E2 ATPase 137 196 - -
Lal7g1410 761 Gene3D - 711 761 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1410 Lal-Chr7 19087825 19094464 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1410 196 761 Primary Pumps ATPases AT5G62670 92.063 0.0 1090
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1410 K01535 - aof:109839442 1062.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1490 19 17326668 17332624 Lal7g1410 7 19087825 19094464 ECH
Lal7g1410 7 19087825 19094464 Lal7g1410 7 19087825 19094464 ECH
Lal14g1925 14 18518589 18525170 Lal7g1410 7 19087825 19094464 LSH
Lal7g1410 7 19087825 19094464 Lal19g1490 19 17326668 17332624 LSH