Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1404 ATGGAGTTTCCTTCAGGGAGATCTGGTTGTGGAGGTGGCGGTGAAGTCAAGGAAGATAAGAGAAGTGATTATAGTGTTAATGATGATGAAGTTCGTCATAATAAACAAGAGACTATTGTTCAGGAACCACCTAGAACTAATACTGAAAGATCCATGCAAGAGGCTGGATCTAAGGAATCCTCCGTCAAAAAGGACAAGGTTGATTATCAGCTTGAAACAGCTAAAGCTGAAATGGGTGAGGTCAAGGAAGAAAATGAACGGTTAAAGATGTGTTTGAACAAAATAATGGATGAGTACAGGACATTGGAAATGCAATTTTATGAAAGAAAAATGTCTACTGATAAAGAAAATAATCATAGCCATCAAGAAATAATAGAAGAATCAGATATGGTTTCACTTAGCCTAGGAAGGGTTCCAAGAAATCATGAAGAGAAAGTTAAAAAAGTGACTGAACCAATATTGAAGGATCATGAAGAATTTAATCAAGACTTGGCTCTTGGACTGGAGTGCAAATATGAAACATCAAAATCAGGAAGCACTACTAATGTAGCTAATTTGCCAAATACTGCAAGCCCGGCCAATAGTTCTGAAGTACAGAAGGAAGAAGCTGGTAAAATACTGAAGACAATGAGAGATGTTGAACATGATGAAGTTTCATTACAAACTCCTGCAAAGAAAGCTAGAGTTTGTGTTAGAGCAAGATGTGACACTCCAACTATGAATGATGGATGCCAATGGAGGAAATATGGGCAAAAAATTTCAAAGGGAAATCCTTGTCCTCGAGCTTACTATCGTTGCACAATTTCATCATCATGCCCAGTAAGAAAACAGGTGCAAAGATGTGTTGAGGACATGTCCATTTTAATCACCACTTATGAAGGTACACACAACCACTCTCTTCCTCTTTCAGCTACTGCCATGGCTTCCACAACTTCTGCAGCTGCTTCCATGCTATTATCTGGTTCATCAACCTCTCACTCTGGTTCAATCCCTTTTAGTTCAACAACCTCAACCATTACTAATCATGCTAATAATAATCTTCATGGCCTCAAATTTTATCTATCAGATGGTTCCAAACCAAAGCAATTATACCTCTCTACTCCTGCACTCACATCTTCACCTTCAAATCCAACCATCACACTAGACCTCACTTCAAACCCACCCTTATCCTCATCTCCCTTTGTTAGATTCAATAATTCAAACTACAATAACCAACCAAGATATCAATCTTCCACTACAAGTCTCAACTTCAGTTCCACTGAATCCAACAACAATGCAATAATGTCTTGGAGTAATAACGGGTTCCTCAACTATGGTAATACTCAACCATATAATAGCAACAAGAACAACATCCTTAGCACTGTAAACTTTGCAAGACAACAACAACAACAACAACAACCAATAGAGAACTTTTACCAACCCTTCATGCAAAACAGCAAGACGTTCCTTCCTCAAGGAGTTACTACCACTCATAATCAACATGGTCTACCAGATACTATAGCTGCAGCAACAAAAGCAATCACAGCAGATCCAACTTTTCAGACAGCGTTGGCTGAAGCACTTAGTTCATTTATTGGAAGTAGTGGTGCTAATGGAAACACACAAGGGAATATTAATGAAGATAATGGAGAAAAGTTGAGTCAAAAAATAAAATGGGCAGAGATGTTTCCAACATCTGCTACTAATTTGGCTAGTTCAACTTCAAAAGCCAATGGTGGTTGTGCACCAAACTTCTTGAACAAAACTTCCACCAATACATAG 1761 0.3833 MEFPSGRSGCGGGGEVKEDKRSDYSVNDDEVRHNKQETIVQEPPRTNTERSMQEAGSKESSVKKDKVDYQLETAKAEMGEVKEENERLKMCLNKIMDEYRTLEMQFYERKMSTDKENNHSHQEIIEESDMVSLSLGRVPRNHEEKVKKVTEPILKDHEEFNQDLALGLECKYETSKSGSTTNVANLPNTASPANSSEVQKEEAGKILKTMRDVEHDEVSLQTPAKKARVCVRARCDTPTMNDGCQWRKYGQKISKGNPCPRAYYRCTISSSCPVRKQVQRCVEDMSILITTYEGTHNHSLPLSATAMASTTSAAASMLLSGSSTSHSGSIPFSSTTSTITNHANNNLHGLKFYLSDGSKPKQLYLSTPALTSSPSNPTITLDLTSNPPLSSSPFVRFNNSNYNNQPRYQSSTTSLNFSSTESNNNAIMSWSNNGFLNYGNTQPYNSNKNNILSTVNFARQQQQQQQPIENFYQPFMQNSKTFLPQGVTTTHNQHGLPDTIAAATKAITADPTFQTALAEALSSFIGSSGANGNTQGNINEDNGEKLSQKIKWAEMFPTSATNLASSTSKANGGCAPNFLNKTSTNT 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1404 586 Coils Coil 64 91 - -
Lal7g1404 586 MobiDBLite consensus disorder prediction 563 586 - -
Lal7g1404 586 Gene3D WRKY domain 225 302 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal7g1404 586 MobiDBLite consensus disorder prediction 177 199 - -
Lal7g1404 586 MobiDBLite consensus disorder prediction 1 65 - -
Lal7g1404 586 Pfam WRKY DNA -binding domain 241 298 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal7g1404 586 PANTHER WRKY TRANSCRIPTION FACTOR 61-RELATED 42 585 - -
Lal7g1404 586 MobiDBLite consensus disorder prediction 40 55 - -
Lal7g1404 586 ProSiteProfiles WRKY domain profile. 235 301 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal7g1404 586 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 42 585 IPR044810 GO:0003700
Lal7g1404 586 SMART WRKY_cls 240 300 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal7g1404 586 MobiDBLite consensus disorder prediction 13 39 - -
Lal7g1404 586 SUPERFAMILY WRKY DNA-binding domain 233 301 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal7g1404 586 MobiDBLite consensus disorder prediction 177 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1404 Lal-Chr7 19007474 19011516 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1404 70 526 WRKY Transcription Factor Family AT1G18860 42.000 2.40e-77 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal7g1404 WRKY 5.8e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1404 - - gmx:100805360 549.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g1391 24 15299874 15303641 Lal7g1404 7 19007474 19011516 ECH
Lal6g0866 6 5888441 5892309 Lal7g1404 7 19007474 19011516 ECH
Lal7g1404 7 19007474 19011516 Lal7g1404 7 19007474 19011516 ECH