Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1402 ATGTCTAATCCTTCAAGTTTCTGCACCCAAGCAAATGCTCTTCTTAGGAAGAATTTAATATACCAGAAACGGAATGTGAAGGCGAATCTTCGTTTGATATTATTCCCAGTAATGTTGTGTGTGTTGCTGGTTGTGTTGCAACGTGTAGTGGACAGTGAAGTGGGAGTGATTTTTGACAAAAACAAATGCAACAAGATAAAACCAGAAAAAGCTGGTGATAGTGGTGGTGGTGGTGGTGGTGGTGGTGGAATTGAGTATGCTCATGCTATTGAATTTGCGACTTGTGCCATTCCCAAACCACCTGAATGGCCTCCTCTCTTTCAAGTTCCTTCTCCTTCTAATCGAGCCATACAAACCAAACATCATTCATTCTCAGATTTGCCTCAACATTCTTGCAGGAGAAGCAAATCCTGCCCTCTAACTATTCTCTATACTGCAACTAATTTCTCTTTTGCACAAAGTACGTCTACTTTTATTATTAACATTAACTGCCATGCATCTCTGTTGGGAAATATGTTCTCAACTCCCTTCAGTGTAGATCCATTGAATATCATAGAAAGTTTGGGCACAGATGTACTGGGATCCGAAACAGTACCAGGGATCAGCAATTTTCTTGAAACTGGTTTCGCTTCAGGTTATCCCATTTATTATCTGCAGAATAAGTGCAAGAAGAACTCTACAATGTTCTTTCCCTTCCAGATAGGTGCCACTCATATGGTGCAAGAGATCAAATGTGCCCAGGTTTTAAGTTTATGGCGAAATAATTCGCATGAGATCAACCACCAGCTATATAAAGGTTACAGAAGAGGTAACAAAAAACGACTGACAAATGAGATAGCTGCAGCTTTTGATCTTCTTAATTCAAATTCGAATAGATTTGTTGTCAACGTTTGGTACAACTCAACTTATGGGGGGTCTAAATTAATTAGTCCTAAAAAATTGATTCGTATTCCTCGTTCTGTGAATCTGATATCAAATGCGTACCTTGAATCTGTGATGGGACCTGGTGTCAAAGTTTTATTAGATTTTATTAAAGAAATGCCAAAATCGGAGATGTCATTTAGGATCGAAATAGGTTCTCTAATAGGCGGTCTGTTCTTTACATGGGTCATCCTGCAACTATTTCCTGTCGTTCTGACATCACTGGTATATGAGAAGCAGCAAAAATTAAGAATTATGATGAAAATGCATGGTCTTGATGATGAACCATATTGGATGATTTCGTATATTTATTTTCTTGCCATATCAGTGATCTACATACTCTGTTTGGTGTTATTTGGCTCACTTATAGCGCTGCTTGCTATATTTTCAGGATTAGCATTCTTCACATTGAATGACTACGGCATTCAATTTGTGTTCTTTTTCATCTACATAAACTTGCAAATTTCACTGGCATTTCTGGCATCTGCTATGTTTTCAGATGTTAAGATTGCTACAGTAACTGCATATATAATTGTCTTTGGATCCGGGCTATTAGGTGGCTTTCTTTTCCAGAATTTCGTTCAAAATACATCATTTCCAAGAGTGTGGATCCTTGTTATGGAGGTGTATCCTGGGTTTGCTTTATATCGAGGGTTATATGAGTTCTCACAATTTGCCTTTGCTGGTGATGGTATGAGATGGAAGGATCTGAGTAATGGCGCAGCTGGCATGAAAGATGTCTTAATTATCATGTCTATTGAGTGGATAGTGGTGCTCTTTGTTGCTTATTACGTCGATCAAGGAAGTGGAGGAAGTCCTTTTTCTTTCTTGAAAAGATTTCAGAAAAAGACTTTCCCATCTACCCAGAAGCCTACTTCCCAAATGCAAGGGTCTAAAGTTATGGTTCAGATGGAGAAACATGATGTCAAGCAAGAGAGGGAGAAGGTGGAGCAAGTGTTACAAGAACCAACTGGTAAGGAAGCAATTGTATGTGATGAGCTTAAAAAGGTATATCCAGGGATGGACGGAAACCCAGACAAATTTGCAGTGAGAGGGTTGTCCCTTGTTGTGCCTCAAGGGGAATGCTTTGGTATGCTTGGTCCCAATGGTGCTGGAAAGACTTCTTTTATCAGCATGATGATTGGTCTGACAAAGCCATCTGCTGGTACAGCATATGTTCAAGGACTGGACATAAGAACTGAAATGAATCAAATATATACTCAACTGGGTGTATGCCCACAATATGACTTGCTGTGGGGAAGCTTGACAGGAAGAGAGCACTTACTTTTTTATGGCAGACTTAAAAATCTTAAAGGTTCTGCCTTAACAAAGGCAGTGGAAGAATCTTTGATGAGTTTAAATATTTTTCATGGAGGTGTTGCTGATAAACCAGCAGGAAGTTATAGTGGAGGCATGAAGAGGAGGCTTAGTGTTGCAATTTCATTGATTGGTGACCCTAAAGTTGTTTATATGGATGAACCAAGTACCGGGTTAGACCCTGCATCGAGAAGTCACTTATGGAAAGTTATTAAACGTGCAAAACAAGGTCGTGCAATCATTCTCACCACACATTCCATGGAAGAAGCAGAGGCCTTATGTGATCGACTAGGAATATTTGTAAATGGTAGCTTGCAGTGTGTAGGAAATTCGAAAGAGTTGAAAGGAAGATATGGAGGAAGTTATGTGTTTACAATGACAACGTCTTTGAATGATGAGAAGGATGTGGAGAACATGGTGTTGAAGCTATCACCAAATGCAAAAAAGATATACCATCTCTCTGGTACACAGAAGTTTGAACTTCCTAAAGAAGAGGTTAAAATAGCAGATGTATTTGAAGCTGTTGAGAATGCAAAGACTCACTTCACAGTTTCTGCATGGGGTATAGCTGACACTACAATGGAAGATGTCTTCATTAAGGTTGCACGAGGGGCTCAAGAATCTATTGCTTTATCATAA 2877 0.3931 MSNPSSFCTQANALLRKNLIYQKRNVKANLRLILFPVMLCVLLVVLQRVVDSEVGVIFDKNKCNKIKPEKAGDSGGGGGGGGGIEYAHAIEFATCAIPKPPEWPPLFQVPSPSNRAIQTKHHSFSDLPQHSCRRSKSCPLTILYTATNFSFAQSTSTFIININCHASLLGNMFSTPFSVDPLNIIESLGTDVLGSETVPGISNFLETGFASGYPIYYLQNKCKKNSTMFFPFQIGATHMVQEIKCAQVLSLWRNNSHEINHQLYKGYRRGNKKRLTNEIAAAFDLLNSNSNRFVVNVWYNSTYGGSKLISPKKLIRIPRSVNLISNAYLESVMGPGVKVLLDFIKEMPKSEMSFRIEIGSLIGGLFFTWVILQLFPVVLTSLVYEKQQKLRIMMKMHGLDDEPYWMISYIYFLAISVIYILCLVLFGSLIALLAIFSGLAFFTLNDYGIQFVFFFIYINLQISLAFLASAMFSDVKIATVTAYIIVFGSGLLGGFLFQNFVQNTSFPRVWILVMEVYPGFALYRGLYEFSQFAFAGDGMRWKDLSNGAAGMKDVLIIMSIEWIVVLFVAYYVDQGSGGSPFSFLKRFQKKTFPSTQKPTSQMQGSKVMVQMEKHDVKQEREKVEQVLQEPTGKEAIVCDELKKVYPGMDGNPDKFAVRGLSLVVPQGECFGMLGPNGAGKTSFISMMIGLTKPSAGTAYVQGLDIRTEMNQIYTQLGVCPQYDLLWGSLTGREHLLFYGRLKNLKGSALTKAVEESLMSLNIFHGGVADKPAGSYSGGMKRRLSVAISLIGDPKVVYMDEPSTGLDPASRSHLWKVIKRAKQGRAIILTTHSMEEAEALCDRLGIFVNGSLQCVGNSKELKGRYGGSYVFTMTTSLNDEKDVENMVLKLSPNAKKIYHLSGTQKFELPKEEVKIADVFEAVENAKTHFTVSAWGIADTTMEDVFIKVARGAQESIALS 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1402 958 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 636 873 IPR003439 GO:0005524
Lal7g1402 958 PANTHER ABC TRANSPORTER A FAMILY PROTEIN 6 954 - -
Lal7g1402 958 ProSitePatterns ABC transporters family signature. 775 789 IPR017871 GO:0005524
Lal7g1402 958 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 6 954 IPR026082 GO:0016021|GO:0055085|GO:0140359
Lal7g1402 958 Pfam ABC transporter 658 802 IPR003439 GO:0005524
Lal7g1402 958 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 620 874 IPR027417 -
Lal7g1402 958 Coils Coil 609 629 - -
Lal7g1402 958 Pfam ABC-2 family transporter protein 358 570 - -
Lal7g1402 958 Gene3D - 622 897 IPR027417 -
Lal7g1402 958 SMART AAA_5 666 850 IPR003593 -
Lal7g1402 958 CDD ABC_subfamily_A 640 861 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1402 Lal-Chr7 18990963 18996935 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1402 640 865 Calmodulin-binding Proteins AT2G36910 25.105 9.54e-15 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1402 - - gmx:100805474 1232.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1402 7 18990963 18996935 Lal7g1402 7 18990963 18996935 ECH