Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1401 ATGGCAAATCCTGCTCCAGCCAGTTTCTGGGCTCAGGCAAACGCTCTTTTCAGGAAGAACTTAACCTATCAGAAACGGAACGTGAAGACAAATATTCGGTTGATCTTGTTCCCAGTGTTACTGTGTGTGATACTGGTTGTGTTGCAACGCATTGTGGACCGTGTACAGAGTAAGGATGATGGTAATATTTGTGTGAAAAACAGTAGTAAAAAAGAAGGTGATGCGAATTGGTATGCAACAGGAGATATAAGTAAAGTTCCAGTGTGTGCCGTTCCTAATCCACCACAATGGCCTCCTTTCTTGCAACTTCCAAATCCATTATTCTCAGCCGTTCAAACCAATATTCTTCCATTTTCTGATTTGCCAAATCACAAGTGCAGGGCTCGTGTCGAATGTCCTTTAACTATGCTCTTCACTGCCTCTAATTTCTCTTTTGCACAATCTGTATATGGAAATATGTTCACAAGCCCCTTCGATATAGATCCCACTGATATTATGGGTAGTTTGGCAACAAATGTCATGGGGAGTGACACAGGGTTAGTGGATAACATTTATTTGGAACCTGCTTTCGCTTTCGATGGTCCTATTTATTATCTACAAAATCAATGCAAACATAACTCAACTTTTAACTTCACCTTCGAGGAAGGTACCGTCACCTTTGACGAGAAAGAGGTCAGATGTGTCCAGTGTTTACGTTTATGGCGTAATAGTTCTTCTGATATAAACTCTGAAATATATAAAGGTTATTATAATGGTAACTCCAAAGGACAGATCAATGAGATAGCTGCAGCTTTTGATCTTCTAAACTCAAATGAGAATGGATTTAATGTCATCATATGGCACAACTCAACCAGGAAGAGGAGTGATGCTCGTTCTATAAATCTTATATCAAATGCCTACCTTCAGTCTGTGGTGGGATCTGGTGCCAAAATGTTATTTGATTTTGTAAAGGAAATGCCAAAACATGAGATCTTATCTAGGATTGATATAGGTTCTCTACTGGGAAGTCTGCTCTATGTATGGGTCATCATGCAACTTTTTCCTGTTGCTCTAGCATCACTGGTATATGAGAAGGAACAAAAATTAAGACTCATGATGCAAATGCATGGTCTTAGTGATGGGCCGTATTGGGTGATATCATATGGTTATTTTCTTGCCATATCAGTGATTTACATGCTGTGCTTTGTGGTATTTGGCTCATTGTTGGGATTAAACTTCTTCAGATTGAATGACTACAGCGTCCAATTTGTGTTTTATTTCATTTATATAAACTTACAAATCTCAGTAGCATTTCTGGTGGCTTCCATGTTTTCTAATGTTAAGACTGCCACAGTAAGTGCATATATAGTTGTCTTTGCAACTGGACTATTAGCAGGCTTTCTTTCTGAATCTTCAATTTCAAGTTCACTTCCAAGTTGGTGGACCATTGTTATGGAGTTGTATCCTGGTTTTGCGCTATGTCGTGGGTTATATGAGTTTGCAGACTCTGCCGCGAGTGGTGATGGTTTGCGGTGGGAGAATATTAATGATAGTACCAATGGCATGATACAGGTCTTAATTATCATGTTCGTTGAGTGGATAGTAGTGCTTTATGTTGCTTATTACATCGATCAAGGAAGAAGTCCTCTTTCTTTCTTCAAAAGATCCCGGAAAAAGCCCTCTTCATCTATCCAAACGCTTGGTATGGGAAAGCAGCAGGGGTATAATGACATGGTTCACTTAGAAAACTCTGATATCATGGAAGAGAGGGAGAAGGTGGAGCAACTGTTACTCCAACCAACTAGTAATCATGCAATTGTTTGTGACGAGCTAAAAAAAGTGTATCCAGGGCAGGATGGAAACCCAGAGAAAGTTGCAGTTAGAGGATTATCCCTTGCTCTGCCTCAAGGGGAATGCTTCGGTATGCTTGGTCCCAATGGTGCTGGAAAAACTTCTTTTATCAATATGATGATTGGTCTTACAAAGCCAACTGCTGGCACAGCATATGTTCAAGGCTTGGATATAAGAAATCAAATAAATAAAATATATACTACTACGGGTGTATGCCCACAGCATGACTTGTTATGGGAAAGCTTGACAGGAAGAGAGCACCTACTTTTTTATGGCAGACTTAAGAATCTTAAAGGTTCAGCCTTAACCCGAGCAGTGGAAGAATCTTTGAAGAATTTAAACATTTTTGATGGAGGAGTTGCTGATAAACGAGCAGGAACTTACAGTGGAGGCATGAAGAGGAGGCTTAGTGTTGCAATTTCATTGATTGGTGACCCTAAAGTTGTTTATATGGATGAGCCAAGTACAGGGTTAGACCCTGCATCAAGAAACAGCTTATGGAATGTTATTAGGGTTGCCAAACAGGATCGTGCAATTATTCTCACTACACATTCCATGGAAGAGGCAGAAGCCTTATGCGATCGATTAGGAATATTTGTAAACGGTAGCTTGCAGTGCATAGGAAATCCAAATGAGCTGAAGAGTAGATATGGAGGAAGTTATGTGTTCACAATGACAACACAAGTGTATCATGAGAAGAATGTAGAGAACATGGTGTTGCAGTTCTCACCAAATGCCAAAAAGATATATCATATATCAGGTACCCAAAAGTTTGAGTTGCCTAAAGGAGAGGTTAGAATAGCAGATGTATTCAGAGCTGTTGAGAATGCAAAGAGACACTTCACAGTTTCTGCATGGGGTTTAGCTGATACTACAATGGAAGATGTTTTCATTAAGGTTGCACGTGGAGCTCAGGAATCTATAGACTTATCATAA 2766 0.3977 MANPAPASFWAQANALFRKNLTYQKRNVKTNIRLILFPVLLCVILVVLQRIVDRVQSKDDGNICVKNSSKKEGDANWYATGDISKVPVCAVPNPPQWPPFLQLPNPLFSAVQTNILPFSDLPNHKCRARVECPLTMLFTASNFSFAQSVYGNMFTSPFDIDPTDIMGSLATNVMGSDTGLVDNIYLEPAFAFDGPIYYLQNQCKHNSTFNFTFEEGTVTFDEKEVRCVQCLRLWRNSSSDINSEIYKGYYNGNSKGQINEIAAAFDLLNSNENGFNVIIWHNSTRKRSDARSINLISNAYLQSVVGSGAKMLFDFVKEMPKHEILSRIDIGSLLGSLLYVWVIMQLFPVALASLVYEKEQKLRLMMQMHGLSDGPYWVISYGYFLAISVIYMLCFVVFGSLLGLNFFRLNDYSVQFVFYFIYINLQISVAFLVASMFSNVKTATVSAYIVVFATGLLAGFLSESSISSSLPSWWTIVMELYPGFALCRGLYEFADSAASGDGLRWENINDSTNGMIQVLIIMFVEWIVVLYVAYYIDQGRSPLSFFKRSRKKPSSSIQTLGMGKQQGYNDMVHLENSDIMEEREKVEQLLLQPTSNHAIVCDELKKVYPGQDGNPEKVAVRGLSLALPQGECFGMLGPNGAGKTSFINMMIGLTKPTAGTAYVQGLDIRNQINKIYTTTGVCPQHDLLWESLTGREHLLFYGRLKNLKGSALTRAVEESLKNLNIFDGGVADKRAGTYSGGMKRRLSVAISLIGDPKVVYMDEPSTGLDPASRNSLWNVIRVAKQDRAIILTTHSMEEAEALCDRLGIFVNGSLQCIGNPNELKSRYGGSYVFTMTTQVYHEKNVENMVLQFSPNAKKIYHISGTQKFELPKGEVRIADVFRAVENAKRHFTVSAWGLADTTMEDVFIKVARGAQESIDLS 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1401 921 Pfam ABC transporter 621 765 IPR003439 GO:0005524
Lal7g1401 921 CDD ABC_subfamily_A 603 824 - -
Lal7g1401 921 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 588 837 IPR027417 -
Lal7g1401 921 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 599 836 IPR003439 GO:0005524
Lal7g1401 921 Pfam ABC-2 family transporter protein 329 534 - -
Lal7g1401 921 ProSitePatterns ABC transporters family signature. 738 752 IPR017871 GO:0005524
Lal7g1401 921 PANTHER ABC TRANSPORTER A FAMILY PROTEIN 6 917 - -
Lal7g1401 921 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 6 917 IPR026082 GO:0016021|GO:0055085|GO:0140359
Lal7g1401 921 SMART AAA_5 629 813 IPR003593 -
Lal7g1401 921 Gene3D - 588 861 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1401 Lal-Chr7 18979351 18987557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1401 603 847 Calmodulin-binding Proteins AT2G36910 22.530 2.90e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1401 - - gmx:100805474 1231.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1401 7 18979351 18987557 Lal7g1401 7 18979351 18987557 ECH