Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1398 ATGGGTTCGGAGAGTGCTGCTCCAATGGTTGAGAAATCAAAAAACAGATCTTCTCCTGGTAAAAAGAACCAAGGGAAAGTCCCTAAGAGAATTCACAAGTCCGAAAGGGAGAAATTGAAGCGCGAACAGTTGAATGAACTCTTTCTTGAACTTGCCAACACACTTGACCTAAATGAGCAGAACAACGGAAAGGCTTCTATATTGTGTGAAACTGCCAGACTACTAAAGGATTTGCTCTGTCAGATTGAGTCCCTCAAAAAGGAAAACATTTCTCTGTTGTCTGAATCTCATTATGTGGCAATGGAGAAAAATGAGTTGAAGGAGGAGAATTCTGGTCTAGAAACTCAAATTGAGAAGCTTCATGGTGAGATACAAGTAAAAATGGCTCAGTCTAAACCTGACCTGAATGCATCCCCGAGTTTGGAACTTGAGCTGCCAACACAGACAAATTATCCAGGGCAGAGTCTCCAATTGCCTTCCATAGAACCTATCATGCAGCAAGGACCTGCTGTTTTGGTTGTTCCCTTTCGTTCTGACCTTCAAGCAGCGTTTTCAGCTCCTAGTGTTGCTGAGCTCGCCCCAAAGCCCGCATCCGTTGTGAGCAAACCACATGCAAGGTATCCCACACCAGCAGATTCATGGCCATCCCAACTTCTTGGATAG 663 0.4449 MGSESAAPMVEKSKNRSSPGKKNQGKVPKRIHKSEREKLKREQLNELFLELANTLDLNEQNNGKASILCETARLLKDLLCQIESLKKENISLLSESHYVAMEKNELKEENSGLETQIEKLHGEIQVKMAQSKPDLNASPSLELELPTQTNYPGQSLQLPSIEPIMQQGPAVLVVPFRSDLQAAFSAPSVAELAPKPASVVSKPHARYPTPADSWPSQLLG 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1398 220 Coils Coil 75 95 - -
Lal7g1398 220 Gene3D - 25 103 IPR036638 GO:0046983
Lal7g1398 220 MobiDBLite consensus disorder prediction 193 220 - -
Lal7g1398 220 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 26 93 IPR036638 GO:0046983
Lal7g1398 220 MobiDBLite consensus disorder prediction 1 38 - -
Lal7g1398 220 PANTHER TRANSCRIPTION FACTOR BHLH47 5 219 - -
Lal7g1398 220 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 28 78 IPR011598 GO:0046983
Lal7g1398 220 PANTHER TRANSCRIPTION FACTOR BHLH47 5 219 - -
Lal7g1398 220 Coils Coil 103 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1398 Lal-Chr7 18960041 18962415 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1398 15 220 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47640 51.327 6.77e-60 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1398 - - mtr:MTR_4g108360 339.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1398 7 18960041 18962415 Lal7g1398 7 18960041 18962415 ECH
Lal14g1915 14 18459458 18462239 Lal7g1398 7 18960041 18962415 LSH