Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1397 ATGGAAGGAGGTGATGATGATCTCCACCACCACCACCACCATCAGCATCAACAGCACAACCGTCAAAACTTCCCATTCCAACTTCTTGAGAAAAAGGAAGACCAAGAAGCAGCATCATGCTCCACCTCATCCCCATACCCAACCCTAGCAATCTCACCCACAGAACCAAGCACTTCCAATTCAAACCGATCCAACCAACTTGTTGCAACTCCATCCACCAACACCTCTACAGAACCCTCAAAGAAGCCACCACCAAAGCGAGCCTCCACCAAGGACCGCCACACCAAGGTGGACGGCCGCGGTCGACGTATCCGAATGCCCGCACTGTGCGCCGCTAGAGTTTTTCAGCTTACCCGCGAGCTCGGGCATAAGTCCGACGGAGAAACCATCGAATGGCTCCTCCAGCAGGCAGAACCCTCCGTCATCGCCGCAACCGGAACGGGCACCATCCCCGCGAACTTCACCTCCCTCAATATCTCCCTAAGAAGCTCAGGGTCCACCTTGTCGGTGCCATCTCAGCTTAGATCCTCGTACTTCAACCCAAACTTCTCGGTTCAACAACAACGCAGGACCTTGTTTCCCGGAATAGGGTTATCTTCTGATAACAACAACAGCAACAACAACACATCAACGCTTCTGAATTTTCAACAATCCAATAACCTAGCCATGTTTCAGGCGAAGCAAGAACTTAGAGACGGTGGTGGGGGTGGGGGTCAATCTTCTTCAACCACGTTGGATTTGTCTGATACTAACACGGTTGAAGTGTTAGGAAGAAAAAGGAGACCAATTGAGCAAGACCTTTCATCAGCGCAGCATCAAATGGGGAATTATCTGCTGCAGTCGAGTGCAGGTGCTATTCCGGCAAGTCACGCTCAGATTCCGGCGAATATATGGATGGTTGCTCAAGCTGCAGCGAATTCAAATAGCCAGGTTATGAGTCATGGTGACCCTATATGGACTTTTCCACAAGTGAATAATAATGCTGCTATGTATAGAGGCACTGTTTCTAGTGGCTTACATTTTATGAACTATCCTACACCCATGGCCTTGTTGCCAGGCCAGCAACAATTAGGATCATCTACTGGTGGTGGTGGTGGTAATATAAATATGAATGAAGGGCATTTGAGTATGCTTGCTGGACTTAGCCCTTATCGGACGGTGATCGGCGTTTCTGAGTCTCAGGCAAGTGGGCCTCAATCTCATCGCGGTGGTAGTGATGATCGCCATGATTCTACAAGTCATCACTCTTAA 1251 0.4948 MEGGDDDLHHHHHHQHQQHNRQNFPFQLLEKKEDQEAASCSTSSPYPTLAISPTEPSTSNSNRSNQLVATPSTNTSTEPSKKPPPKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTSLNISLRSSGSTLSVPSQLRSSYFNPNFSVQQQRRTLFPGIGLSSDNNNSNNNTSTLLNFQQSNNLAMFQAKQELRDGGGGGGQSSSTTLDLSDTNTVEVLGRKRRPIEQDLSSAQHQMGNYLLQSSAGAIPASHAQIPANIWMVAQAAANSNSQVMSHGDPIWTFPQVNNNAAMYRGTVSSGLHFMNYPTPMALLPGQQQLGSSTGGGGGNINMNEGHLSMLAGLSPYRTVIGVSESQASGPQSHRGGSDDRHDSTSHHS 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1397 416 PANTHER TRANSCRIPTION FACTOR TCP14-LIKE 12 415 - -
Lal7g1397 416 Pfam TCP family transcription factor 89 213 IPR017887 -
Lal7g1397 416 ProSiteProfiles TCP domain profile. 90 144 IPR017887 -
Lal7g1397 416 MobiDBLite consensus disorder prediction 392 416 - -
Lal7g1397 416 MobiDBLite consensus disorder prediction 38 83 - -
Lal7g1397 416 MobiDBLite consensus disorder prediction 402 416 - -
Lal7g1397 416 MobiDBLite consensus disorder prediction 1 103 - -
Lal7g1397 416 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 12 415 IPR005333 GO:0003700
Lal7g1397 416 MobiDBLite consensus disorder prediction 84 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1397 Lal-Chr7 18951276 18952526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1397 80 361 TCP Transcription Factor Family AT3G47620 46.087 1.58e-66 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lal7g1397 TCP 4.5e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1397 - - cam:101512124 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1478 19 17264367 17265602 Lal7g1397 7 18951276 18952526 ECH
Lal7g1397 7 18951276 18952526 Lal7g1397 7 18951276 18952526 ECH
Lal14g1914 14 18452938 18455163 Lal7g1397 7 18951276 18952526 LSH
Lal7g1397 7 18951276 18952526 Lal19g1478 19 17264367 17265602 LSH