Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1391 ATGGTCATGGAGTCTCCACCACTAATGTTTTGGCAATCCAACTTTGAACTGGATCAAAACCCATCTCTTGTTACGTGCCAATTTCCAGCATTTGATAACTGCACAAGCGGAAATGATAACGGGTCTCTTTCACAAGACAATTTGCCACTCGAATTTCCCTTACAAGATAACTATCTTGATGCTGTCCCTTTTATGGAGCCTTTTTTCTCTCCAAATATTTTATATAACCATCCCACAGTTGAACCAATATCAAGTGTACCAGTTCAAGATTATGAATTTTATGATATCAGAAAAGGGTTTTCTGGTTGGAATGATATTGATGCAGAATTTGAAAAGGAAAAAGTTTTTTTCTTTTGCAACAAAGAGGAAAGTGGAATTGAAGTGACAGAAGATGGTAATTTCATGAATGGCAAAAAAGGTAGAGAAGAAAGAAATGGAAGTACTAGAATGTTATCAAGGAAGACAATATCTCAATACTTCTACATGCCCATAACACAAGCAGCTAGAGAACTTAACGTAGGGCTTACACTTCTAAAGAAAAGGTGCAGGGAATTGGGAATTAGAAGGTGGCCTCACAGAAAGTTGATGAGCCTTCAAACTCTAATAAATAATGTTCAGGAACTAGGGAAAGAGGAGGGGCAAGAAAGTGATATAAAGTTAAGGAATGCGATTGAGATATTGGAGAAGGAAAAGAAAATGTTGGAAGAAACGCCAGATATGCAACTAGAAGATAATACAAAAAAACTTAGACAAGCGTGTTTTAAGGCGAGCTACAAGAAGAGGAAGCTTATGGGAATGATGGAATCACAATCTTCTTCTTCTACTCTCAGTGGTCGTGTAACAAATATTGACATATTTTAG 861 0.3682 MVMESPPLMFWQSNFELDQNPSLVTCQFPAFDNCTSGNDNGSLSQDNLPLEFPLQDNYLDAVPFMEPFFSPNILYNHPTVEPISSVPVQDYEFYDIRKGFSGWNDIDAEFEKEKVFFFCNKEESGIEVTEDGNFMNGKKGREERNGSTRMLSRKTISQYFYMPITQAARELNVGLTLLKKRCRELGIRRWPHRKLMSLQTLINNVQELGKEEGQESDIKLRNAIEILEKEKKMLEETPDMQLEDNTKKLRQACFKASYKKRKLMGMMESQSSSSTLSGRVTNIDIF 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1391 286 ProSiteProfiles RWP-RK domain profile. 132 218 IPR003035 -
Lal7g1391 286 Coils Coil 217 237 - -
Lal7g1391 286 Pfam RWP-RK domain 151 198 IPR003035 -
Lal7g1391 286 PANTHER PROTEIN RKD4 55 274 IPR044607 GO:0003700
Lal7g1391 286 PANTHER PROTEIN RKD1-RELATED 55 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1391 Lal-Chr7 18907597 18908895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1391 52 266 AtRKD Transcription Factor Family AT1G18790 48.624 1.49e-57 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Lal7g1391 RWP-RK 4.8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1391 - - gmx:100788666 311.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1391 7 18907597 18908895 Lal7g1391 7 18907597 18908895 ECH
Lal14g1906 14 18410564 18411670 Lal7g1391 7 18907597 18908895 LSH