Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1382 ATGGGAGTTTTGGGGATTGTGTTGGTGGGGTTTGTTCTCTCTGTAGGATCAAGTGTGTATGCAAATGGTGATGGTTGGATGGAAGCTCATGCAACCTTCTATGGAGGAGGGGATGCCTCTGGCACAATGGGTGGAGCTTGTGGATATGGAAACCTGTATAGCCAAGGGTATGGTACTGACACAGCTGCTTTAAGTAGAGCCTTGTTTGGAAATGGTGAGAGCTGTGGGGCATGTTTTGAGATTAAGTGTGTGAATGACCAAAGGTGGTGTCTACCTGGTTCCATTATGGTCACAGCTACCAATTTCTGCCCACCAAACAATGCCCTACCAAATAATGCAGGTGGCTGGTGCAACCCTCCCCTTCAACATTTTGATCTCTCTCAGCCCATCTTCCAACAAATAGCTCATTACAGTGCTGGCATAGTACCCATAATGTACAAAAGGGTACCGTGTCAAAAGTTAGGAGGTATCAGATTCACCATCAATGGCCACTCTTACTTCAACCTAGTCCTAATCACCAACGTGGGTGGTGCTGGTGATGTTCGAGCAGTTTCCATCAAAGGTTCAAGAACTAATTGGCAACCAATGTCCAGGAACTGGGGTCAGAATTGGCAAAGCAACTCGTACCTCAATGGACAAAGCCTCTCTTTTAAGGTTACCACTAGTGATGGCCAAACCTCAGTCTCTTATAATGTTGCCCCTGCTAGTTGGTCCTTTGGACAGACCTTCACAGGGAAACAATTTCCTTAA 750 0.4627 MGVLGIVLVGFVLSVGSSVYANGDGWMEAHATFYGGGDASGTMGGACGYGNLYSQGYGTDTAALSRALFGNGESCGACFEIKCVNDQRWCLPGSIMVTATNFCPPNNALPNNAGGWCNPPLQHFDLSQPIFQQIAHYSAGIVPIMYKRVPCQKLGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTNWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGQTSVSYNVAPASWSFGQTFTGKQFP 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1382 249 SUPERFAMILY PHL pollen allergen 155 245 IPR036749 -
Lal7g1382 249 Pfam Expansin C-terminal domain 157 234 IPR007117 -
Lal7g1382 249 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 44 156 IPR007112 -
Lal7g1382 249 SUPERFAMILY Barwin-like endoglucanases 25 174 IPR036908 -
Lal7g1382 249 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 166 245 IPR007117 -
Lal7g1382 249 Pfam Lytic transglycolase 61 146 IPR009009 -
Lal7g1382 249 Gene3D - 12 152 IPR036908 -
Lal7g1382 249 PRINTS Expansin signature 56 70 IPR002963 GO:0009664
Lal7g1382 249 PRINTS Expansin signature 83 94 IPR002963 GO:0009664
Lal7g1382 249 PRINTS Expansin signature 95 105 IPR002963 GO:0009664
Lal7g1382 249 PRINTS Expansin signature 114 131 IPR002963 GO:0009664
Lal7g1382 249 PRINTS Expansin signature 131 144 IPR002963 GO:0009664
Lal7g1382 249 PRINTS Expansin signature 155 167 IPR002963 GO:0009664
Lal7g1382 249 PRINTS Expansin signature 167 188 IPR002963 GO:0009664
Lal7g1382 249 PRINTS Expansin signature 202 223 IPR002963 GO:0009664
Lal7g1382 249 PRINTS Expansin signature 231 247 IPR002963 GO:0009664
Lal7g1382 249 PANTHER EXPANSIN 6 248 - -
Lal7g1382 249 PRINTS Expansin/Lol pI family signature 25 40 IPR007118 GO:0005576
Lal7g1382 249 PRINTS Expansin/Lol pI family signature 43 61 IPR007118 GO:0005576
Lal7g1382 249 PRINTS Expansin/Lol pI family signature 65 83 IPR007118 GO:0005576
Lal7g1382 249 PRINTS Expansin/Lol pI family signature 139 155 IPR007118 GO:0005576
Lal7g1382 249 PRINTS Expansin/Lol pI family signature 193 207 IPR007118 GO:0005576
Lal7g1382 249 PRINTS Expansin/Lol pI family signature 231 245 IPR007118 GO:0005576
Lal7g1382 249 SMART dpbb_1 61 146 IPR007112 -
Lal7g1382 249 Gene3D - 156 248 IPR036749 -
Lal7g1382 249 PANTHER EXPANSIN-A15 6 248 IPR002963 GO:0009664
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1382 Lal-Chr7 18878352 18879929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1382 1 248 Expansin Gene Family AT2G03090 77.823 1.32e-144 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1382 - K20628 gmx:100816718 431.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0741 22 5320566 5323401 Lal7g1382 7 18878352 18879929 ECH
Lal18g0893 18 11563257 11565475 Lal7g1382 7 18878352 18879929 ECH
Lal23g0804 23 10552495 10554734 Lal7g1382 7 18878352 18879929 ECH
Lal7g1382 7 18878352 18879929 Lal7g1382 7 18878352 18879929 ECH