Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1375 ATGGCGCTGTTCAGAAGGTTCTTCTACCGGAAACCCCCGGATCGGCTTCTTGAGATCTCTGAGAGAGTTTATGTTTTTGATTGTTGCTTCTCCACGGATGTCTTGGAAGAAGATGAGTACAGAGTTTATATGGGAGGAATTGTGGCTCAGCTACAGGATCACTTTCCAGATGCATCTTTCATGGTATTCAACTTTAAAGAAGGGGAAAGACGCAGCCAAATCTCAGACATTTTTTCTCAGTATGACATGACAGTTATGGAATATCCTCGGCAATATGAGGGTTGTCCACTACTGCCTTTGGAGATGGTCCATCACTTTCTTCGATCAAGTGAAAGCTGGTTGTCTTTGGAGGGGCAACAAAATGTGCTTTTGATGCATTGTGAAAGGGGAGGTTGGCCGGTGCTGGCATTTATGCTGGCAGGTCTTCTATTATACCGGAAACAGTACAGTGGGGAGCAGAAGACTCTTGAAATGGTCTACAAGCAAGCCCCCAGAGAACTTCTCCACCTTTTATCTTCCTTGAACCCACAACCTTCTCAGTTCAGATATCTTCAGTATATTTCCAGGAGACATTTGGGTTCCGAGTGGCCCCCATCAGATACACCCTTGTATTTGGACTGTATTATTCTTAGAGACATTCCATTATTTGATGAAGGAAAAGGTTGCAGGCCTGTTGTACGTGTTTATGGCCCGGACCCATCAAAACCTGCGAATAGAAGTTCAGAGCTTCTTTTTTCAACTTCAAAGTCCAAAAAGCATATCCGCCACTACTCACAGGCAGAGTGTATGCTTGTGAAAATTGATATCCACTGTCATGTTCAAGGAGATGTCGTTCTTGAGTGCATACATTTAAATGAAGATTTTACTCATGAGGAGGTGATGCTTAGAGTCATGTTCCATACCGCATTTGTGCGGTCAAATATATTGATGCTGAGCCGTGATGACATTGATATTTTGTGGGATGCAAAGGACCAATTTCCCAAGGACTTCAAAGCAGAGGTGCTTTTTTTGGATGCTGATGCTGTTATACCTGATCTAACCACAGTCACGGTGAGTGAAGATGCAAATGAGACTGAAAGCGCTGAGACTGAAAGCGCTTCACCTGAGGAATTCTATGAAGTGGAAGAGATTTTCAGTAATGTAATTGATGCACAGGAAGGGAAGGGGGAGTATGATTCTTTTGCTTTCCATGACAATTCAGTGGATGATGAAAAAAATAAAGGGGTCTGGAAGGATGAGGTGGATCCTCATTATTTTCTCGATTATCCTCCTGATGAGGGGAGTAACAAACAGGTTGGCAAACTGGATTCTGTTATTAATGAGGTGAAAGACATATCTGTTGATGATGTGAAGTACAGGACTGATGAGAGCGTGGATCCAGATAATGATGCAGTGAAGGACATTGCTGTGGATGAAGGAGAAAACAAGTCAACTTCTACTGCACTGGCTTCTGATAAATTTCTGGAAACAATGGAAACCACCTTGGATGTGCACGGGGAATTGACACTTGAGCAAAATAAATATGACGAAGATGACAAAGCAACAGAAAAGGAATTAGATTTCAAGGCCGGGCAGCAGATGCCTGATCTTTCCAGACCTGAATCTGGTAAACTACTTCCATCTGCTGTAAAGAAACAACTTCCATCCAACTCAAAGCCTTTGGGAGATACAGTTTCAGCAAAACCAAAGAATAAACAAGAATCACTAGGTTTTCAGGTAAAACAAGCTAAGCCAAATGCAGTAACTAGGTGGATTCCTTCTAACAAGGGTTCTTACACCAGTTCAATGCATGTATATTATCCGCCATCAAGGATTAATAGTGCACCAGCTGCTTTGTCAAAATTCACAACTTCAAAGGAGAAATTGGAAGATTCCAAAGCAAGGTCTTTATCTGCTCCTCATGTCTCTGCAGCAGTTGTTTCTATTGACATGACAAATGACCTGAAAAGTCGTAAGGTGGCTGCTTCAAATTCTTCAGGCCACATAGTAGCAGAAGCGGATGCAAACTGTCTACCATCATCATTACTGTCAGTTAAAGAGACATGTCTTGAGTCAGCTATTCAAACAGAAGTAAGCTCAGAACTACGACTTCCTCCACCTCCTCCTCCTCCGCCAACTCACGCCAGAAACTCTTCTTTAGATGTTTTTGAACCCGTATCATTAAAGGATGATGCATCACCAGTCCCTCCATCGCTACCAACTTTAATATCATTTACTGGACAAAAAGTTGGGGTGAATTTACAACCTGCAACTTCTCCTCCTCCCCCTCCTCCTCCACCCTCATTTTTTGGGCAAAATAAAGGGAGCTTCCTTCCTTCTCCATCTCCTTGGAAGTCTCTCTATTCATCAATCGCCATAGTTGAAGAGACTAATGGTTCTCTACCACTTCCCTCATACAGCAGTGACAATTTATCAGAAGTTTCTGAAGTTCTTACTGTGGTAGCCCCTCCTCCACCACCACCACTGCCTCCTCCAAGATACGGAGTTTCATCCATTCCTCCTACTTCACCACCACCACCATCAGCAGCACCTCCTCCAAAGCATGGAATTCCCCCTCCTCCCCCTCCCCCTCCCCCTCTTCCTACATTTTCCACACATAGGACTCCACCCCCTCCTCCACCACCCCCAACTGCATCAAAAGTTCCATCAACACCTCCTTCTCTTTCTCCATCTATTCCTCCGCCTCCTTTTAGCAATGCTCCAAAGCTTCCACCACCTCCACCTCCACCACCGCCACCTCCTCCTTATAGTAGTGCTCCACCACCACCACGTCTCCCTCCTTTTAATGAAGCTCCCCTTCCACCGCCCCCACCTCCACCTCCACCTCCACCTCCACCTCCTTATAATAGTTCTCCACCGCCACCACCTCCTCCCCCTTTTAGTAAAGCTGCCGTGCCACCAGCTCCACCTCCTTATAGTAGTGCTCCTTCGCCACCACCTCCACCTCCATTTGGTAGGGCTCCTCCACCACCACCTCCACCTCCATTTGGTAGGGCTCCTCCACCACCACCTCCACCTCCATTTGGTAGAGCTCCTCCGCCACCTCCTCCTCCTCCATTTGGTAGAGCTCCTCCACCACCACCTCCACCTCCATTTGGTAGTGCTCCCCTGCCACCACCTCCACCTCCTCATAGTAGTGCTCCTCCGCCACCGCCTCCACCTCCCTTTGGTAGAACTCCCCCACCACCGCCTCCACCTCCATTTGGTAGAACTCCCCCGCCACCGCCTCCACCTCCTTATAGCAGTGCTCCACCGCCTCCACCTCCACCTCCATTTGGTAGAGCTCCACCATCCCTACCACCACCTCCTCCATCAAATGGAGCCCCACCTCCACCTCCACCTCCTCCATTGTCTGGAGCTCCACCTCCCCCACCTCCACCAGCTCGTGGAGCCCCACCACCTCCTCCAATGCATGGAGCTCCACCTCCTCCGCCCCCTCCTGGTGGTCGAGGACCACCTCCTCCACCCCCTCCTGGTGGTAGAGGCCCACCTCCCCCACCTCCCCCTGGTGCTCCCGGTGCTCCTCCTCCTCCTAGACCTCCTGGTGGTGCACCTCCACCACCTCCACCAAAAGGTGCAAATGTTGGAGCTGATCCAAGAGGGAGAGGGCGTGGTGGATATGCACGCCCAGGAGGGCCTGGTGCTATGGCAGCACCCAAGCGATCCTCTTTAAAGCCTCTACATTGGAGTAAGGTTACAAGGGCATTGCAAGGAAGCTTATGGGAAGAATTACAAAGACATGGAGAACCTCTAATTGCACCAGAGTTTGATGTATCAGAGTTAGAGAAGCTTTTCTCTGCTAATGTTCCAAAGCCTGCTGAATCTAAAACTGGACGGCGTAAATCTGCTGGATCTAAACCCGACAAAGTCCACTTGGTTGACCTGAGGAGGGCTAATAATACTGAAATTATGCTCACTAAGGTTAAGATGCCACTTCCTGATATGATGGCTGCAGTACTGGCTATGGATGAGTCAGTATTAGATGTTGATCAGGTGGATAATCTTATAAAGTTTTGTCCCACCAAAGAGGAGATGGAACTTTTGAAGGGATACACAGGTGACAAGGAGAACTTGGGGAGGTGTGAACAGTTTTTTTTGGAGTTGATGAAGGTGCCACGGGTGGAATCAAAATTAAGAATATTCTCTTTCAAGATTCAGTTTGGGTCTCAGGTTACAGAATTCAAGAAGAGTTTAAACACTGTGAACTCTGCCTGTGAAGAGGTCCGAATTTCTGTCAAACTAAAGGAGATCATGAAGAAAATTCTTTTTTTGGGTAATACATTGAATCAAGGAACTGCACGAGGGTCTGCAGTTGGGTTCAAGTTGGATAGTCTCTCAAAGCTCACCGACACCCGTGCTACTAACAATAAGATGACACTGATGCATTATCTTTGCAAGGTCCTTGCTGAAAAGTCGCCTGGACTCCTTGATTTTCACCTAGACCTTGTTAGCCTGGAACCTTCGACCAAGATACAATTGAAGTCATTAGCAGAAGAGATGCAGGCAATCATCAAGGGATTAGAAAAGGTTAAACAGGAGCTTGCTGCATCTGTAAATGATGGACCCGTGTCTGACATTTTCCGTAAGACATTGAAAGGTTTCATAGATGTAGCCGAGTCCGAGGTGGCATCTCTAACAAATCTATATTCCGTGGTGGGTAGAAATGCAGATGCACTTGCACTATACTTTGGTGAGGATCCTGCCCGTTGTCCGTTTGAGCAAGTTACTGTAACTCTCTTAAATTTTGTGAGGTTGTTTCGGAAAGCACATGAAGAGAATTTTAAACAAGCAGAATTAGAGAGGAAGAAAGCTGAAAAAGAGGCTGAAATGGAGAAGGCTAAGGGCGTTAGTTTGACAAAGAAGAGTGCAAAAAATAGTTGA 4881 0.4683 MALFRRFFYRKPPDRLLEISERVYVFDCCFSTDVLEEDEYRVYMGGIVAQLQDHFPDASFMVFNFKEGERRSQISDIFSQYDMTVMEYPRQYEGCPLLPLEMVHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGEQKTLEMVYKQAPRELLHLLSSLNPQPSQFRYLQYISRRHLGSEWPPSDTPLYLDCIILRDIPLFDEGKGCRPVVRVYGPDPSKPANRSSELLFSTSKSKKHIRHYSQAECMLVKIDIHCHVQGDVVLECIHLNEDFTHEEVMLRVMFHTAFVRSNILMLSRDDIDILWDAKDQFPKDFKAEVLFLDADAVIPDLTTVTVSEDANETESAETESASPEEFYEVEEIFSNVIDAQEGKGEYDSFAFHDNSVDDEKNKGVWKDEVDPHYFLDYPPDEGSNKQVGKLDSVINEVKDISVDDVKYRTDESVDPDNDAVKDIAVDEGENKSTSTALASDKFLETMETTLDVHGELTLEQNKYDEDDKATEKELDFKAGQQMPDLSRPESGKLLPSAVKKQLPSNSKPLGDTVSAKPKNKQESLGFQVKQAKPNAVTRWIPSNKGSYTSSMHVYYPPSRINSAPAALSKFTTSKEKLEDSKARSLSAPHVSAAVVSIDMTNDLKSRKVAASNSSGHIVAEADANCLPSSLLSVKETCLESAIQTEVSSELRLPPPPPPPPTHARNSSLDVFEPVSLKDDASPVPPSLPTLISFTGQKVGVNLQPATSPPPPPPPPSFFGQNKGSFLPSPSPWKSLYSSIAIVEETNGSLPLPSYSSDNLSEVSEVLTVVAPPPPPPLPPPRYGVSSIPPTSPPPPSAAPPPKHGIPPPPPPPPPLPTFSTHRTPPPPPPPPTASKVPSTPPSLSPSIPPPPFSNAPKLPPPPPPPPPPPPYSSAPPPPRLPPFNEAPLPPPPPPPPPPPPPPYNSSPPPPPPPPFSKAAVPPAPPPYSSAPSPPPPPPFGRAPPPPPPPPFGRAPPPPPPPPFGRAPPPPPPPPFGRAPPPPPPPPFGSAPLPPPPPPHSSAPPPPPPPPFGRTPPPPPPPPFGRTPPPPPPPPYSSAPPPPPPPPFGRAPPSLPPPPPSNGAPPPPPPPPLSGAPPPPPPPARGAPPPPPMHGAPPPPPPPGGRGPPPPPPPGGRGPPPPPPPGAPGAPPPPRPPGGAPPPPPPKGANVGADPRGRGRGGYARPGGPGAMAAPKRSSLKPLHWSKVTRALQGSLWEELQRHGEPLIAPEFDVSELEKLFSANVPKPAESKTGRRKSAGSKPDKVHLVDLRRANNTEIMLTKVKMPLPDMMAAVLAMDESVLDVDQVDNLIKFCPTKEEMELLKGYTGDKENLGRCEQFFLELMKVPRVESKLRIFSFKIQFGSQVTEFKKSLNTVNSACEEVRISVKLKEIMKKILFLGNTLNQGTARGSAVGFKLDSLSKLTDTRATNNKMTLMHYLCKVLAEKSPGLLDFHLDLVSLEPSTKIQLKSLAEEMQAIIKGLEKVKQELAASVNDGPVSDIFRKTLKGFIDVAESEVASLTNLYSVVGRNADALALYFGEDPARCPFEQVTVTLLNFVRLFRKAHEENFKQAELERKKAEKEAEMEKAKGVSLTKKSAKNS 1626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1375 1626 MobiDBLite consensus disorder prediction 813 1194 - -
Lal7g1375 1626 MobiDBLite consensus disorder prediction 745 769 - -
Lal7g1375 1626 Pfam Formin Homology 2 Domain 1219 1586 IPR015425 -
Lal7g1375 1626 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1287 1614 - -
Lal7g1375 1626 PANTHER FORMIN-J 982 1620 - -
Lal7g1375 1626 PANTHER FORMIN-J 1 954 - -
Lal7g1375 1626 MobiDBLite consensus disorder prediction 690 711 - -
Lal7g1375 1626 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
Lal7g1375 1626 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1214 1612 IPR015425 -
Lal7g1375 1626 Gene3D Protein tyrosine phosphatase superfamily 14 205 IPR029021 -
Lal7g1375 1626 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Lal7g1375 1626 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Lal7g1375 1626 MobiDBLite consensus disorder prediction 749 763 - -
Lal7g1375 1626 MobiDBLite consensus disorder prediction 454 478 - -
Lal7g1375 1626 MobiDBLite consensus disorder prediction 1598 1618 - -
Lal7g1375 1626 MobiDBLite consensus disorder prediction 1274 1288 - -
Lal7g1375 1626 MobiDBLite consensus disorder prediction 454 473 - -
Lal7g1375 1626 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 336 IPR035892 -
Lal7g1375 1626 MobiDBLite consensus disorder prediction 1598 1626 - -
Lal7g1375 1626 MobiDBLite consensus disorder prediction 1269 1288 - -
Lal7g1375 1626 SMART it6_source 722 1626 IPR015425 -
Lal7g1375 1626 Coils Coil 1493 1517 - -
Lal7g1375 1626 MobiDBLite consensus disorder prediction 544 570 - -
Lal7g1375 1626 MobiDBLite consensus disorder prediction 521 570 - -
Lal7g1375 1626 Coils Coil 1587 1616 - -
Lal7g1375 1626 Gene3D Formin, FH2 domain 1215 1598 IPR042201 -
Lal7g1375 1626 SMART PTEN_C2_2 198 338 IPR014020 -
Lal7g1375 1626 MobiDBLite consensus disorder prediction 811 1222 - -
Lal7g1375 1626 Gene3D - 206 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1375 Lal-Chr7 18829150 18841369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1375 1 613 FH2 protein (formin) Gene Family AT5G07740 64.448 0.0 804
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1375 - - lang:109353635 1191.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1375 7 18829150 18841369 Lal7g1375 7 18829150 18841369 ECH
Lal7g1375 7 18829150 18841369 Lal19g1464 19 17179333 17191143 LSH