Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1374 ATGGGGTGTGTGTTTGTGAAGCAAGGGGTGTCAGTGACCCCTGCAATTGATAACTCAGTTGAGTCAGATAGGAACAACAACAATAACATTAACAAGAAGAATAAGAAGAAGAATAGGTGTGAATCAGTGAGAGGGAGTTGGAGTGATTTGGGTGACTCAGGAAAAGGGAGTGAGTCCTTGAGTTTCAGGTTGGGGAATCTGCATAAGTATGTTGAAGGGGACCAAGCCGCCGCAGGTTGGCCTGCTTGGCTCAGCGCCGTTGCATCTGAAGCCATTCATGGTTGGGTGCCTCTACATGCTGATGCATATGAGAAACTTGAAAAGGTTGGGCAGGGTACATATAGCAGTGTTTTCCGGGCAAGGGAGCTTGAGACTGGGAAGATAGTGGCTCTGAAGAAGGTGAGATTTGACAATTTTGAGCCAGAAAGTGTCAGGTTTATGGCTCGAGAAATAATGATTCTTAGAAGGCTTGATCATCCAAACATCATTAAATTGGAGGGCTTGATCACTTCCAGATTGTCTTGTAGCATATACCTTGTGTTCGAGTACATGCAGCATGACATCACAGGCCTCTTGTCTAGACCAGAAATTAAGTTTAGTGAACCACAGATTAAATGCTATATGAAACAGTTATTAAGTGGTCTTGAGCATTGTCACTCACGGGGTGTAATGCACCGAGACATCAAAGGATCAAATCTTCTGGTGAATAATGAAGGGATATTAAAGGTAGCAGATTTTGGATTGGCAAACTACTTCAGCTATGGGAACAAGCAGCCACTAACCAGCCGTGTTGTCACCTTATGGTACCGCCCTCCCGAGCTTTTGCTCGGTTCAACAGATTATGGTCCACCTGTGGATCTCTGGAGTGTTGGCTGTGTATTTGCAGAGCTACTGCTTGGAAAGCCTATTCTTCAAGGGAGAACTGAGGTTGAACAATTGCACAAAATCTTCAAGCTTTGTGGCTCCCCACCCGATGAATACTGGAAAAAGACCAGGCTTCCTCATGCAACTTTGTTCAAGCCACATCTACCATATGATAGTTGCCTCCAGGAGACATTTAAAGATTTGCCTGCAACCACTGTAAATCTGTTACAAACTCTTCTTTCTGTTGAACCAAACAAACGCGGGACTGCCTCATCTGCTCTCTCATCGGAGTATTTCAAATCAAAACCTTATGCATGTGATCCATCAAGCTTGCCAGCATACCCACCTAGCAAGGAGATTGATGCAAAACCCCAGGAGGAATCAAAAAGGAAAAAGATTGGTGGGCGAGTTTGTGGACATGAAACAAGAAAACCATCAAGAAAGCCATTAGGAGCAGGACTCAGTAAATTAGTCCCAGCAGAGGATTTGACAAGTCAAACTCAAATTTCACAAAAGGTTGATGATAAATCTATCAACATCCTTAAAGAAGAAAACACTAACATAGGTAAAGAGGCACCAAAGCCATGTAATAGTAAAGCAGAAGGTGCTTCCAATTTGAAGAATGCATCTCAAGTAGATATTCACAACATTTCCTTTCCTGGACAATTGCAAGTTTCAAAATCAAGTGGCTTTGCTTGGGCAAAAAGGCATAAAGATGACAATTCAGTTAGATCACATTGCCGAACTATTTCTAGAGGGCATATATTTAATTCATTAGAAACTTGCACACTAAATTCAAAGAATGATTCTGACTCCAGAAACCATGAAAATAAGGAACTTTGTGGGGAACGCACTAACTCTAGGGGTCATGATATGCTTGAAATATCTAACCTTGCAATGCAAAATCAATGGAGTAAGTTTGATCGTCCAGATTCATTTGATACTTCTGATGAGTATCATTCACAAGAACTATCTATGGCGCTTTATCGTAGAGATGATTCATTATCCAAGAGAAGTAGCCAGAGTTATCAGGATCAAGCAGAAAAGGTGGAATATTCAGGACCCCTACTATCTCAAATGCACACAGTTGATGAGCTCTTAGAAAGACACGAGCATCACATCCGGCGTATTGTCAGAAGATCATGGTTTCAGAAAGGTATAATAACAGTAAGAAGCATGGGAAGTAATTGGAAGGGTAGAGACCTAGAACAACATATCAAAGTGACACAAAAAGTCCTTCTAAGAGGGCCATCACAATTCTCCAAGCACAATGCTATGAGCAAAAAATGA 2154 0.4183 MGCVFVKQGVSVTPAIDNSVESDRNNNNNINKKNKKKNRCESVRGSWSDLGDSGKGSESLSFRLGNLHKYVEGDQAAAGWPAWLSAVASEAIHGWVPLHADAYEKLEKVGQGTYSSVFRARELETGKIVALKKVRFDNFEPESVRFMAREIMILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMQHDITGLLSRPEIKFSEPQIKCYMKQLLSGLEHCHSRGVMHRDIKGSNLLVNNEGILKVADFGLANYFSYGNKQPLTSRVVTLWYRPPELLLGSTDYGPPVDLWSVGCVFAELLLGKPILQGRTEVEQLHKIFKLCGSPPDEYWKKTRLPHATLFKPHLPYDSCLQETFKDLPATTVNLLQTLLSVEPNKRGTASSALSSEYFKSKPYACDPSSLPAYPPSKEIDAKPQEESKRKKIGGRVCGHETRKPSRKPLGAGLSKLVPAEDLTSQTQISQKVDDKSINILKEENTNIGKEAPKPCNSKAEGASNLKNASQVDIHNISFPGQLQVSKSSGFAWAKRHKDDNSVRSHCRTISRGHIFNSLETCTLNSKNDSDSRNHENKELCGERTNSRGHDMLEISNLAMQNQWSKFDRPDSFDTSDEYHSQELSMALYRRDDSLSKRSSQSYQDQAEKVEYSGPLLSQMHTVDELLERHEHHIRRIVRRSWFQKGIITVRSMGSNWKGRDLEQHIKVTQKVLLRGPSQFSKHNAMSKK 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1374 717 MobiDBLite consensus disorder prediction 557 574 - -
Lal7g1374 717 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 48 672 - -
Lal7g1374 717 Gene3D Transferase(Phosphotransferase) domain 1 186 426 - -
Lal7g1374 717 SUPERFAMILY Protein kinase-like (PK-like) 96 394 IPR011009 -
Lal7g1374 717 ProSitePatterns Protein kinases ATP-binding region signature. 109 132 IPR017441 GO:0005524
Lal7g1374 717 MobiDBLite consensus disorder prediction 17 38 - -
Lal7g1374 717 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Lal7g1374 717 ProSiteProfiles Protein kinase domain profile. 103 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal7g1374 717 Gene3D Phosphorylase Kinase; domain 1 90 185 - -
Lal7g1374 717 SMART serkin_6 103 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal7g1374 717 MobiDBLite consensus disorder prediction 408 435 - -
Lal7g1374 717 MobiDBLite consensus disorder prediction 398 441 - -
Lal7g1374 717 CDD STKc_CDK9_like 103 387 - -
Lal7g1374 717 PANTHER CELL DIVISION PROTEIN KINASE 48 672 - -
Lal7g1374 717 Pfam Protein kinase domain 103 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal7g1374 717 MobiDBLite consensus disorder prediction 552 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1374 Lal-Chr7 18820973 18826488 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1374 95 419 Core Cell Cycle Gene Families AT5G10270 50.147 3.13e-111 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Lal7g1374 Pkinase 3.3e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1374 - - gmx:100784406 1071.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1463 19 17172527 17178011 Lal7g1374 7 18820973 18826488 ECH
Lal7g1374 7 18820973 18826488 Lal7g1374 7 18820973 18826488 ECH
Lal7g1374 7 18820973 18826488 Lal19g1463 19 17172527 17178011 LSH