Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1357 ATGGCGGCGTCTACGAAGCGGTGTCACTACGAGGTCCTCGCCGTCTCCCGAGATTCCTCCCCCGACGAAATCCGATCAGCCTATCGCCGCCTCGCCCTTCAGCGCCACCCTGACAAGCTCGTCCAATCCGGCATCTCCCAATCCGAAGCCACCGCTCAGTTTCAGGAGCTTCAGCATGCCTACGAGGTTCTCTCTGACCCTAAGGAACGTGCTTGGTATGACTCTCACCGTTCTCAGATCCTATTTTCGGACACTAACTCCGTTGGTAGCTCCGTTGTCCCTGACCTATTCCCATTTTTCTCTAACACCGTCTATAACGGCTACACCGACTCCGGTAAGGGTTTTTATAAGGTTTATTCTGATGTATTTGATAAAATTCACTCTAATGAGATCAATTTCGCGAAGAAGATGGGGATTGGTGTTGATTCGGTTCGACAGGCTCCGGTTATGGGGAATTTGGAGAGTCCCTATGCTCAGGTTACGGCGTTTTATAGTTACTGGCTTGGTTTTGCGACGGTTATGGATTTCTGTTGGGTTGATGAGTATGATGTTATGGCTGGTCCGGACAGGAGAACAAGACGCCGTATGGAGGAGGAGAATAATAAGGCGAGGAAGAAGGCAAGGAAGGAGTATAATGATACTGTGAGGAAATTGGCTGATTTTGTAAAGAAGAGGGATAAGAGGGTGATCGATATGAAGGTGAAGAAGAATGCGGAGATGGAGAAAAAGAAGGAGGAGGAGAGGGAGATGAAGAGGAGGTTGGAGAAGGAGAAGAAGGAGAGGGCGATGAAGTATGAGGAGCCAGATTGGGCAAAGGTGAATGAGGATGAGGTGAATGATTGGGTTGAGGAGTTGGAGGAGGAGGAGGAGAAGAAGGAAGAGAAGGAGTTTTATTGTGTGCTGTGTGGGAAAAAGTTTAAGAGTGAGAAGCAATGGAAGAATCATGAGCAGTCTAAGAAGCATAAGGAGAAGGTTGTCGAGTTTAGGGATTCACTTGATGATGACATAGAAGAGCAGGTTGAAGAGGATTTAGAAGTGGAGGTGGAAGGAGAGGGATTGGAAAGTGAGATGAATGGGATTGAGGTGAATGACGTTCGGTCGGGGGATGATGATGATTATGTGGTTGATGATTTGGAGGGGAGAGTTAGAGATGGTCTCAATGTTGCAGAGGAGAAGACTAGAAATGGAGTTGAGCTTGATGATGATGACCATGCTGATGATGGCGGTGGTGAGTTTTTTGATTCAAAGGAAAGGGAGGAGGCTGGTGTGTCGTTAGATTTGGACGGAGCTGATGAAATTGATGTTCTTGAAGCAATGGTGGCTGGGCACAAGAGCAGAAAACCCAATGCTTCAAAGCAGAAACCCGAGGCTTCGGTAGATACAACCCACATTGAGAATGAGAATGATGAGGTTTTCACAATGGAATATGACAACCGAAAGGGCACAAGAAAGAAACGAGGATCCAAAAAAGAGAAGGGTAGGAAAAATTGGGAAGAATCTAATGCGGCTGCCAATGGGGATCATGGGAATATGGACAATAAGGGAAATGATAATTCCTATGCAGAGGAGTCCACTTCACAACATTTTGTGGAAAATGAGGGTAATAGTAAAGGAAATGAGCCTGTAGGTAAACATAAGAAGGCGGCAAGTGAACTAGCTGATAAAAAAGGAAATGCCAAGGATACAAAAACCAAAGCTAAAAGTTCATCCAAAGGAAGAAAAGGAAAGAATCTTGGCAACAGTTGTGACGCATGTGGAGAGGAGTTTGAGTCAAGAAATAAATTACATATGCATCTTGGAGAAACTGGGCATGCCACAATAAAAAGACGATAA 1833 0.4566 MAASTKRCHYEVLAVSRDSSPDEIRSAYRRLALQRHPDKLVQSGISQSEATAQFQELQHAYEVLSDPKERAWYDSHRSQILFSDTNSVGSSVVPDLFPFFSNTVYNGYTDSGKGFYKVYSDVFDKIHSNEINFAKKMGIGVDSVRQAPVMGNLESPYAQVTAFYSYWLGFATVMDFCWVDEYDVMAGPDRRTRRRMEEENNKARKKARKEYNDTVRKLADFVKKRDKRVIDMKVKKNAEMEKKKEEEREMKRRLEKEKKERAMKYEEPDWAKVNEDEVNDWVEELEEEEEKKEEKEFYCVLCGKKFKSEKQWKNHEQSKKHKEKVVEFRDSLDDDIEEQVEEDLEVEVEGEGLESEMNGIEVNDVRSGDDDDYVVDDLEGRVRDGLNVAEEKTRNGVELDDDDHADDGGGEFFDSKEREEAGVSLDLDGADEIDVLEAMVAGHKSRKPNASKQKPEASVDTTHIENENDEVFTMEYDNRKGTRKKRGSKKEKGRKNWEESNAAANGDHGNMDNKGNDNSYAEESTSQHFVENEGNSKGNEPVGKHKKAASELADKKGNAKDTKTKAKSSSKGRKGKNLGNSCDACGEEFESRNKLHMHLGETGHATIKRR 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1357 610 PRINTS DnaJ domain signature 10 28 IPR001623 -
Lal7g1357 610 PRINTS DnaJ domain signature 28 43 IPR001623 -
Lal7g1357 610 PRINTS DnaJ domain signature 49 69 IPR001623 -
Lal7g1357 610 SMART ZnF_U1_5 294 328 IPR003604 GO:0003676|GO:0008270
Lal7g1357 610 ProSitePatterns Nt-dnaJ domain signature. 54 73 IPR018253 -
Lal7g1357 610 MobiDBLite consensus disorder prediction 409 425 - -
Lal7g1357 610 MobiDBLite consensus disorder prediction 386 401 - -
Lal7g1357 610 Pfam DnaJ domain 9 74 IPR001623 -
Lal7g1357 610 MobiDBLite consensus disorder prediction 439 583 - -
Lal7g1357 610 Coils Coil 193 213 - -
Lal7g1357 610 MobiDBLite consensus disorder prediction 538 568 - -
Lal7g1357 610 Coils Coil 271 295 - -
Lal7g1357 610 Gene3D DnaJ domain 1 90 IPR036869 -
Lal7g1357 610 Gene3D Classic Zinc Finger 283 344 - -
Lal7g1357 610 PANTHER DNAJ PROTEIN JJJ1 HOMOLOG 1 610 IPR044648 -
Lal7g1357 610 SUPERFAMILY Chaperone J-domain 4 89 IPR036869 -
Lal7g1357 610 Pfam Zinc-finger double-stranded RNA-binding 297 322 IPR022755 -
Lal7g1357 610 SMART c2h2final6 297 321 IPR013087 -
Lal7g1357 610 SMART c2h2final6 580 604 IPR013087 -
Lal7g1357 610 ProSitePatterns Zinc finger C2H2 type domain signature. 582 604 IPR013087 -
Lal7g1357 610 ProSiteProfiles Zinc finger C2H2 type domain profile. 297 321 IPR013087 -
Lal7g1357 610 SUPERFAMILY beta-beta-alpha zinc fingers 285 337 IPR036236 -
Lal7g1357 610 SMART dnaj_3 7 69 IPR001623 -
Lal7g1357 610 MobiDBLite consensus disorder prediction 449 482 - -
Lal7g1357 610 MobiDBLite consensus disorder prediction 386 427 - -
Lal7g1357 610 CDD DnaJ 8 66 IPR001623 -
Lal7g1357 610 ProSitePatterns Zinc finger C2H2 type domain signature. 299 321 IPR013087 -
Lal7g1357 610 ProSiteProfiles Zinc finger C2H2 type domain profile. 580 609 IPR013087 -
Lal7g1357 610 Coils Coil 230 264 - -
Lal7g1357 610 MobiDBLite consensus disorder prediction 511 534 - -
Lal7g1357 610 ProSiteProfiles dnaJ domain profile. 8 77 IPR001623 -
Lal7g1357 610 MobiDBLite consensus disorder prediction 346 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1357 Lal-Chr7 18713888 18716840 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1357 1 610 C2H2 Transcription Factor Family AT1G74250 50.455 0.0 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lal7g1357 DnaJ 2.2e-21 CL0392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1357 K09506 - gmx:100788305 747.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1357 7 18713888 18716840 Lal19g1451 19 17090525 17095869 LSH