Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1347 ATGGTGATTGAAAATTCAAGTAAAGGTTATCAAGCCAAGGGTGAGAGTGATACTACTAACAGTGAGAAGTTGTCAATGGCACCATCTACTACTTCAACCTCTTCAAGACAATGGGCAGCATTCAGAAATCCAAGAATAGTGAGAGTTTCACGTGCTTTGGGAGGAAAAGATAGGCATAGCAAGGTTTGCACCATAAGGGGGTTGAGGGACAGGAGGATTAGGCTTTCTGTGCCAACAGCAATTCAGTTATATGATCTTCAAGACAGGCTTGGTCTCAGTCAACCTAGCAAAGTCATAGATTGGTTGATTGAAGCCTCAAAACTTGATATTGATAAGCTCCCTCCACTTCAAATCCCTCATGGTTTCCCTCAATTTCATCATCAACAAACCCTATTGCCTTATCAACATCATGAATCAAGTCCCTATCATCACCATCATCACTTTTCTCTTGGAGGCTTCTATGATGCTAATCTTTCAACAATCATGAAAGATAGTGGAAATCATCAAAATCTCTTGCCAAAGTCAAGGTTGAATTGGGATTTAGATTCAGAACATTCAAGAATGAAGGGCAAGGAAGCTGAAAGTGTATTGTCCACTATCTCACAAAAAGGAAAGTGGATCAAAACTGGTAGTGAACAAGAAAACCAAGATGGAATTGATGGTTATAATAGACAGAAATTTTTCCCTGGTTTATTAAACAACGCAATGGTATATGACTCATACCATCCCGAGCCTTCAATTTTATCTTTATCCCAATTTGCAGGCCACGGATCATTGTTTCCTTCCCATGTAGATCCTCATCAAAACAGTGGCAGTGGCAGTGTGCAATTTTCATCTTCTAATGTGGCTGTGCCATCTGGTTCTCAATTACTTTTTTCTCCATCTTCTTCTACACCATCAATTTTCACTCCCTACGCTCCATTTATGGCCAACTCATCAGTGGAAAATGATCCAAGACAATTCAACCATGTTCAAATCTTGAGCTCATCAAGTAATAATTCACAAGTCATGCAGCCTCATCCTCTCATTCAGTCTTTCCATTCACTCAGTTCACCTCTCAGACGCCTTCCGTTACCATTCAATTCCAAGCTTCTTGACTCAGATAACAACAATCGTAGGGACCCAAATGAGGGAAGTGGTTCTCCTTCTTGA 1152 0.4036 MVIENSSKGYQAKGESDTTNSEKLSMAPSTTSTSSRQWAAFRNPRIVRVSRALGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVIDWLIEASKLDIDKLPPLQIPHGFPQFHHQQTLLPYQHHESSPYHHHHHFSLGGFYDANLSTIMKDSGNHQNLLPKSRLNWDLDSEHSRMKGKEAESVLSTISQKGKWIKTGSEQENQDGIDGYNRQKFFPGLLNNAMVYDSYHPEPSILSLSQFAGHGSLFPSHVDPHQNSGSGSVQFSSSNVAVPSGSQLLFSPSSSTPSIFTPYAPFMANSSVENDPRQFNHVQILSSSSNNSQVMQPHPLIQSFHSLSSPLRRLPLPFNSKLLDSDNNNRRDPNEGSGSPS 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1347 383 Pfam TCP family transcription factor 55 181 IPR017887 -
Lal7g1347 383 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 3 376 - -
Lal7g1347 383 MobiDBLite consensus disorder prediction 360 383 - -
Lal7g1347 383 MobiDBLite consensus disorder prediction 1 37 - -
Lal7g1347 383 ProSiteProfiles TCP domain profile. 55 113 IPR017887 -
Lal7g1347 383 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 3 376 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1347 Lal-Chr7 18666917 18668717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1347 4 351 TCP Transcription Factor Family AT5G60970 41.240 1.56e-54 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lal7g1347 TCP 4.3e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1347 - - lang:109361996 485.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1347 7 18666917 18668717 Lal19g1444 19 17064477 17065610 LSH