Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1345 ATGAGTGGATCAAGAAGTGAAAGAGCGCCTCTCTTAGAAGCTGAGCGCGCTGAAGGGGGAAAGAGGGATGATGTCGCTGCAGGTCAAGTCTCAGACCTTGAGCATGGTGATGCAGTGCCGGCGGCAAATGTGGGATTCTTTCGAGTGTTTTCACTTGCAAAGCCTGAGGCTGGAAAGTTGGTAATTGGTACAGTGGCCCTATTGATTGCAGCCACAACAAGTGTCCTAGTTCAAAAATTTGGTGGGAAGATAATTGACATTGTCTCAGGAGATCTTCGAACACCTGAAGAGAAAGACAAAGCTTTAAATGCTGTTAAGGGCACAATTCTAGAAATATTTCTGATTGTTATTGTTGGTTCTGTTTGCTCAGCACTTCGAGCTTGGCTTTTTTCTTCTGCTAGTGAAAGAGTTGTTGCACGGCTGAGAAAGAATTTGTTCAGTCACCTTGTAAACCAGGAAATTGCCTTCTTTGATGTTACTCGAACTGGGGAACTTTTAAGTAGGCTATCAGAAGATACGCAGATCATAAAGAATGCTGCAACTACCAATCTTTCCGAGGCACTCAGAAACTTATCAACTGCACTTATTGGTCTCAGCTTCATGTTTGCAACATCATGGGAGTTAACATTGTTGGCTTTGGCTGTTGTGCCTGTTATTTCTGTCGCTGTTCGCAAATTTGGCCGTTTCCTGCGTGAACTTTCTCATAAAACTCAAGCTGCAGCTGCAGTAGCTTCTTCAATTGCTGAGGAATCTTTTGGTGCTATAAGGACAGTAAGATCTTTCGCTCAAGAGGATTATGAAATATCGCGCTACTCTGAGAAAGTTGATGAGACACTTAAGCTTGGACTTAAGCAAGCTAAAGTCGTTGGACTCTTTTCTGGAGGCCTTAATGCAGCATCTACACTTTCAGTTATTGTAGTTGTTATATATGGAGCTAATTTGACAATCAAAGGTTCCATGACCTCGGGTGATCTTACGTCTTTCATTCTTTATAGTCTCTCAGTGGGATCTTCTATATCTGGTCTGTCAGGATTGTATACGGTAGTTATGAAAGCTGCAGGTGCTAGCAGAAGGGTATTTCAAATTATGGATCGTATTTCATCCATGCCCAAGTCTGGAAATGAGTGTCCTCTGGGTGATCAAGATGGGGAAGTGGAACTAGATGATGTATGGTTTTCCTATCCATCACGCCCTAATCATATGGTGCTCAAGGGCATTACAATGAAACTGCGGCCTGGCTCAAAGGTTGCTCTTGTTGGTCCTAGTGGTGGCGGAAAGACTACAATAGCCAACTTAATTGAAAGATTTTATGACCCAACCAAGGGGAATATTCTGGTGAATGGGGTTCCTCTGGTTGAAATATCACACGAGCATTTACACAGAAAGATAAGCATAGTGAGTCAGGAGCCTACACTTTTCAACTGTTCCATAGAGGAGAACATAGCTTATGGATTTGATGGCAAAGTTAACACTGTTGATATAGAAAATGCAGCGAAAATGGCCAATGCACATGAATTCATATCAAAATTCCCAGAGAAATATCAGACTTTTGTTGGAGAGCGTGGGGTAAGGCTTTCGGGTGGGCAGAAACAGAGAATAGCAATTGCTAGAGCCCTGCTTATGGACCCTAAAATTCTCCTTCTTGATGAAGCCACCAGTGCCTTAGATGCTGAAAGTGAATACCTAGATGCCATGGATTCTCTTATGAAGGGAAGGACAGTTCTAGTTATTGCTCATAGGTTATCAACAGTTAAAACTGCTGATACTGTTGCAGTTGTTTCAGATGGAGAAGTAGTTGAGAGGGGCACCCATGATGAGCTTCTGAGCAAGGATGGTGTCTATACTGCATTAGTTAGAAGACAACTACAGACAGCAAAATCTGAGTCAATCTGA 1893 0.4263 MSGSRSERAPLLEAERAEGGKRDDVAAGQVSDLEHGDAVPAANVGFFRVFSLAKPEAGKLVIGTVALLIAATTSVLVQKFGGKIIDIVSGDLRTPEEKDKALNAVKGTILEIFLIVIVGSVCSALRAWLFSSASERVVARLRKNLFSHLVNQEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNLSTALIGLSFMFATSWELTLLALAVVPVISVAVRKFGRFLRELSHKTQAAAAVASSIAEESFGAIRTVRSFAQEDYEISRYSEKVDETLKLGLKQAKVVGLFSGGLNAASTLSVIVVVIYGANLTIKGSMTSGDLTSFILYSLSVGSSISGLSGLYTVVMKAAGASRRVFQIMDRISSMPKSGNECPLGDQDGEVELDDVWFSYPSRPNHMVLKGITMKLRPGSKVALVGPSGGGKTTIANLIERFYDPTKGNILVNGVPLVEISHEHLHRKISIVSQEPTLFNCSIEENIAYGFDGKVNTVDIENAAKMANAHEFISKFPEKYQTFVGERGVRLSGGQKQRIAIARALLMDPKILLLDEATSALDAESEYLDAMDSLMKGRTVLVIAHRLSTVKTADTVAVVSDGEVVERGTHDELLSKDGVYTALVRRQLQTAKSESI 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1345 630 Pfam ABC transporter transmembrane region 60 333 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal7g1345 630 PANTHER ABC TRANSPORTER B FAMILY MEMBER 25 3 625 - -
Lal7g1345 630 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 377 621 IPR027417 -
Lal7g1345 630 MobiDBLite consensus disorder prediction 9 24 - -
Lal7g1345 630 CDD ABC_6TM_AtABCB27_like 63 359 - -
Lal7g1345 630 ProSitePatterns ABC transporters family signature. 525 539 IPR017871 GO:0005524
Lal7g1345 630 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 61 351 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal7g1345 630 Gene3D - 379 626 IPR027417 -
Lal7g1345 630 MobiDBLite consensus disorder prediction 1 24 - -
Lal7g1345 630 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 3 625 IPR039421 -
Lal7g1345 630 Pfam ABC transporter 403 553 IPR003439 GO:0005524
Lal7g1345 630 Gene3D ABC transporter type 1, transmembrane domain 37 366 IPR036640 GO:0005524|GO:0016021
Lal7g1345 630 SMART AAA_5 412 603 IPR003593 -
Lal7g1345 630 PIRSF ABC_prm/ATPase_B 7 630 - -
Lal7g1345 630 CDD ABC_MTABC3_MDL1_MDL2 385 621 - -
Lal7g1345 630 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 385 620 IPR003439 GO:0005524
Lal7g1345 630 SUPERFAMILY ABC transporter transmembrane region 48 364 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1345 Lal-Chr7 18648609 18654249 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1345 113 621 Calmodulin-binding Proteins AT2G36910 40.499 5.65e-101 332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1345 7 18648609 18654249 Lal7g1345 7 18648609 18654249 ECH