Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1330 ATGGGGTGCTCATTTTCTGGTTTAAATGCTTTATACGACACCGTTCACGGTGGTGGAGATGACGTCTGGATCAACGACAACCGTTTCCGCGTCGTTAAGCAGCTCGGTGAAGGTGCTTTCGCTTATGTCTTCCTCGTCAAAGAGATTCTCTCTGATTCATCTTCTTCTGGCCTCGCTTCTAACCTCAAACACTCTTCTCATATCTCAGATGACGGAACTTATGCTATGAAAAGGGTCCTCATTCAGAACAGTGAACAGCTGGAGTTGGTAAGGGAGGAGATCCGTGTTTCATCTTTGTTCAATCACCCGAATCTGCTCCCTCTTCTTGACCATGCAATTATCTCTGTTAAGCCTACCCAAGAAAAATCATGGACCAACGAGGCGTACTTGTTATTTCCAGTTCATTTAGATGGAACATTGCTTGACAATGCCAAAACAATGACAGCCAAGAAGGAATTCTATTCTACCTCAGATGTTCTTCAAATTTTTCGCCAGCTTTGTGCCGGACTCAAGCATATGCACACTTTAGATCTTCCATATGCTCACAATGATGTCAAACCTGGTAATGTTCTCATAACACATAGAAAAGGTGAACCACCTCTTGCCATACTGATGGATTTTGGCAGTGCTCGACCTGCCAGGAAGCAAGTTAGATCCAGACAGGAGGCACTCCAGTTGCAGGAATGGGCATCTGAACATTGCTCTGCTCCTTTCCGAGCTCCTGAGCTGTGGGATTGCCCAAGCCATGCTGATATAGATGAGAGGACAGATGTTTGGTCGCTAGGATGTACATTGTATGCAATAATGTATGGGGTATCACCATTTGAATATGCACTCGGAGAATCTGGTGGAAGCCTGCAATTGGCTATCATTAATGCTCAGATCAAATGGCCAGCTGGACCTAAGCCGTCATATCCAGATGCTCTCCGTCAGTTTGTGTCATGGATGCTCCAACCACAGGCCACTGTGCGGCCCCATATTGAAGATATCCTTATCCATGTTGATAAGTTGATTGCAAAGTTCTCTCAGTGA 1032 0.4535 MGCSFSGLNALYDTVHGGGDDVWINDNRFRVVKQLGEGAFAYVFLVKEILSDSSSSGLASNLKHSSHISDDGTYAMKRVLIQNSEQLELVREEIRVSSLFNHPNLLPLLDHAIISVKPTQEKSWTNEAYLLFPVHLDGTLLDNAKTMTAKKEFYSTSDVLQIFRQLCAGLKHMHTLDLPYAHNDVKPGNVLITHRKGEPPLAILMDFGSARPARKQVRSRQEALQLQEWASEHCSAPFRAPELWDCPSHADIDERTDVWSLGCTLYAIMYGVSPFEYALGESGGSLQLAIINAQIKWPAGPKPSYPDALRQFVSWMLQPQATVRPHIEDILIHVDKLIAKFSQ 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1330 343 Gene3D Phosphorylase Kinase; domain 1 13 133 - -
Lal7g1330 343 CDD STKc_16 28 339 - -
Lal7g1330 343 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
Lal7g1330 343 PANTHER - 1 342 - -
Lal7g1330 343 Pfam Protein kinase domain 63 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal7g1330 343 ProSiteProfiles Protein kinase domain profile. 29 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal7g1330 343 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 1 342 - -
Lal7g1330 343 Gene3D Transferase(Phosphotransferase) domain 1 136 341 - -
Lal7g1330 343 SUPERFAMILY Protein kinase-like (PK-like) 21 333 IPR011009 -
Lal7g1330 343 SMART serkin_6 29 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1330 Lal-Chr7 18539561 18543021 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1330 34 333 EF-hand Containing Proteins AT4G04710 25.243 6.90e-16 76.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Lal7g1330 Pkinase 2.3e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1330 K08856 - gmx:100803659 612.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1330 7 18539561 18543021 Lal7g1330 7 18539561 18543021 ECH
Lal7g1330 7 18539561 18543021 Lal19g1425 19 16939301 16943099 LSH