Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1327 ATGGGTGGTAGCGACAGCGAGGTAGAGAAGAAAAAGGTGCTTGCTTTGGCTCCTATTGCTAAACCCCTCGCTGGGAAGAAGCTTTCAAAGCGCACTCTTAAGCTTGTTCGTAGAGCTGCACAACACAAGTGCTTAAAGAGAGGTGTCAAAGAGGTTGTCAAAAGCATAAGGCGCGGTCATAAAGGATTATGTGTTATTGCTGGGAATATATCTCCAATTGATGTCATCACTCATGTTCCTATCTTGTGTGAAGAGTCTGACATTCCCTATGTTTATGTTCACTCTAAAGAAGACCTTGCAACTGCAGGAGCAACAAAGAGGCCTACTTGCTGCGTTTTGGTTATGACAAAGCCTTCAAAGGGTGATCTAGATCAAGGGGAACAAGAGAAACTAAAGTCAGATTATGACCAAGTTGCAGCGGAAATTACTGAGATTACAGCTTCACTTTTTTGA 453 0.4305 MGGSDSEVEKKKVLALAPIAKPLAGKKLSKRTLKLVRRAAQHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYVYVHSKEDLATAGATKRPTCCVLVMTKPSKGDLDQGEQEKLKSDYDQVAAEITEITASLF 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1327 150 PRINTS High mobility group-like nuclear protein signature 18 31 IPR002415 GO:0003723|GO:0005730
Lal7g1327 150 PRINTS High mobility group-like nuclear protein signature 31 46 IPR002415 GO:0003723|GO:0005730
Lal7g1327 150 PRINTS High mobility group-like nuclear protein signature 48 58 IPR002415 GO:0003723|GO:0005730
Lal7g1327 150 PRINTS High mobility group-like nuclear protein signature 92 104 IPR002415 GO:0003723|GO:0005730
Lal7g1327 150 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 33 116 IPR004038 -
Lal7g1327 150 PRINTS Ribosomal protein L7A/RS6 family signature 45 59 IPR018492 -
Lal7g1327 150 PRINTS Ribosomal protein L7A/RS6 family signature 64 77 IPR018492 -
Lal7g1327 150 PRINTS Ribosomal protein L7A/RS6 family signature 80 90 IPR018492 -
Lal7g1327 150 PRINTS Ribosomal protein L7A/RS6 family signature 90 104 IPR018492 -
Lal7g1327 150 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 6 149 - -
Lal7g1327 150 SUPERFAMILY L30e-like 11 120 IPR029064 -
Lal7g1327 150 PANTHER - 6 149 - -
Lal7g1327 150 Gene3D - 11 146 IPR029064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1327 Lal-Chr7 18522485 18523723 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1327 45 117 Cytoplasmic Ribosomal Protein Gene Family AT2G47610 30.137 2.70e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1327 K11129 - gmx:100305515 262.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1327 7 18522485 18523723 Lal7g1327 7 18522485 18523723 ECH