Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1320 ATGAGTGATGGAAGGAAGAGGAGGAGGTTCCACTTGGGAAAAATCCATGCATTCTCGCGAGGGAAAGCAGTGAAAGAAGAACAATCACTTATAGGAGGCCCTGGCTTCTCAAGAAAAGTATATATCAATGACCCTGAAAGGGTTGAGTCAAATCTTGTGAATTATGGTGATAATTATGTTAGGACTACTAAATATACATTGGCCACTTTTATTCCCAAGTCCTTGTTTGAGCAATTTAGGAGGGTTGCCAATTTCTACTTCCTTGTGGTAGCAATTTTGTCTTTCTTACCTGTTTCTCCATACTCAGCTGTCAGTAATGTTGTTCCTCTAGTGTTTGTGGTTGCTGTTTCCATGGGGAAAGAGTTACTTGAAGATTGGAAGCGAAAAACACAGGATATAGAGATGAATAACAGAAAGGTCAAAGTACATCGCGGCGGTGGTGTTTTTGACGTGTCTAAATGGAGGGATTTGAGAGTTGGAGACATCGTGAAGGTGGAAAAGGATGAATTTTTCCCTGCTGATCTCATCTTACTTTCATCAAGTTATGAGTATGCGGTTTGCTATGTTGAGACCATGAATCTTGATGGAGAAACAAATCTTAAGCTGAAACAAGCACTGGAAGGAACTTCAAAGTTTCAAGAAGACTCAAGCTTTGGAAATTTCAAGGCTGTCATTAGATGTGAAGATCCGAATGCAAATTTGTATGCGTTTGTAGGCAGTCTGGACCACGAGGATCAGCAGAGTCCTCTTACGCCTCAGCAGCTACTTCTTAGGGACTCAAAGCTGAGGAATACAGATTTTATCTATGGTGTGGTAATCTTTTCTGGTCATGATACAAAGGTTATGCAGAATTCAACAGAGCCTCCATCCAAGAGAAGCAAAATTGAGAAACGGATGGATAAGGTTATCTACTGCTTGTTTTTTCTATTAGTTTTGATTTCCATTATTGGCTCCATATTCTTTGGGATTTCAACAAAGGATGACCTTGAAAATGGAAGAATGAAGAGATGGTACCTTAGACCAGACGATTCCACAATCTACTACGACCCAAAGAACGCGGCAATTGCAGCACTTCTGCATTTCTTGACGGCGGTTATGTTGTACGGTTATTTCATTCCAATTTCCTTGTACGTTTCAATTGAAATTGTGAAAGTTCTTCAAAGCGTTTTCATCAACCAGGACATTCACATGTATTATGTGGAAACCGACCAGCCAGCGCATGCTCGTACCTCAAATTTGAATGAGGAACTTGGGCAAGTTGAGACCATACTTTCAGATAAGACAGGAACCTTGACTTGCAACTCAATGGAATTTATCAAGTGTTCTATTGCTGGGGTTGCTTATGGACGAGTAGCTACAGAAGTTGAGAGAGCTCTATCCAGTAGAAAAGATTCACCTTTTGGTCAAAAGTTCGAAGGAGGCAACATTGTTGCAAAGTCAACCATTAAAGGGTTTAACTTTCAGGATGAAAGGATCATGAATGGAAATTGGGCCAGAGAACCCAATGCCAATGTAATACAGAACTTCCTACGGTTGTTGGCTGTGTGCCATACTGCAGTACCTGAAGTTGATGAGAAAACTGGTAAAATATCATATGAAGCTGAATCACCGGATGAGGTAGCTTTTGTGGTTGCAGCCAGAGAACTCGGGTTTGAGTTTTATGAAAGGACACACACAACTACTTCAGTGCGTGAGTTAAATCCCAAATCTGCCAACAAAACTCGAAGGTCCTACAAACTTTTAAATATACTAGAATTTAGTAGTGCTAGAAAGCGGATGTCTGTAGTTGTAAGAGATGAGGAGGGGAAACTCCTACTACTTAGCAAAGGCGCTGACAATGTCATGTTTGAACGCCTAGCAAAGAATGGAAGGGAGTTTGAAGAAAAGACTAAACAACACATAAGTGAATATGCTGATTCTGGTTTGAGGACCTTAATACTTGCATACCGTGAACTTGATGAGGAAGAGTACAATAAATTTAATAAAGAATTCACAGAGGCAAAGAACTTAGTGAGTGCAGATCAGGAGCATATTCTAGAGGAAATATCACAAAATATTGAGAAGGACTTGATTCTTCTTGGAGCTACTGCTGTTGAAGATAAACTTCAAAATGGGGTTCCTGAATGCATTGACAAGCTGGCACAGGCTGGGATTAAGCTATGGGTTTTGACTGGTGATAAAATGGAGACAGCTATCAACATCGGATTTGCTTGTAGTTTACTTAGACAAGGAATGAAACAGATTATAATTAGCTCAGACACTCCAGAAATTAAATCTCTGGAGAACATGGAGGATAAGTCTGCTTCTGAAAAGGCAATCAAGGCAAGTGTTCTTCGTCAAATAAAGAACGGAAAGGCTTTAATATCTACACCAGATGAAAACTCTGATGCGTTAGCTCTAATCATTGATGGGAAGTCTCTTACCTATGCACTAGAAGATGATGTCAAGGACTTGTTTCTTGAACTTGCTGTTGGCTGTGCATCTGTTATATGCTGTCGTTCTTCTCCCAAGCAGAAAGCACTTGTTACTAGACTGGTTAAGATCAAAACTGGTAAGACAACTCTAGCGATTGGAGATGGGGCAAATGACGTTGGAATGCTCCAAGAAGCAGACATTGGGATTGGTATCAGTGGTGTTGAAGGAATGCAGGCTGTTATGTCAAGTGATATTGCAATTGCCCAATTTCGGTTTCTAGAGCGCTTACTTCTTGTGCATGGACATTGGTGCTACAGAAGGATCTCATCAATGATCTGTTACTTCTTTTACAAGAATATTGCCTTTGGCTTCACTCTATTCTTCTATGAGATGTATGCCTCATTCTCAGGGCAACCTGCATACAACGATTGGTGCATGTCACTATATAACGTATTCTTCACTTCGCTTCCAGTAATTGCTTTGGGAGTGTTTGACCAGGATGTCTCTTCTAAATTATGTCACAAGTTTCCATTGTTATATGAAGAAGGATTGCGAAATGTCCTATTTAGCTGGAAAAGAATAATTGGTTGGGCATTCAATGGGGCTGTGAGTGCTGCAATTATATTCTTCTTTTGCATTCGCGCCATGGAGCACCAGGCATTCCGTAAAGGTGGAGAAGTTGTTGGACTCGAAGTCCTTGGCACCACCATGTACACTTGTCTTGTGTGGGTGGTGAATTGCCAGATGGCATTATCTATCAGTTACTTTACTTATATACAACATATATTCATCTGGGGAAGCATTCTGTTCTGGTACATATTCCTCATGATATATGGAGCCATTGACCCTTCCTTTTCAACCACTGCTTATGAGGTCTTCATCGAAGCTCTTGCTCCAGCACCATCTTTCTGGTTCATCACTTTACTTGTCGTTATCGCTTCCGTTATTCCATATTTTGCCTATGCTTCCATCCAAACCCGTTTCTTCCCTGTGTATCATCAACTGATACAATGGATGAGGACAGATGGGCAAGTAAATGATCCAGAACTCTGTAAAATGGTGCGGCAGAAATCTATACGAAACACAACAGTTGGATTCACAGCTCGTTTGCAAGCATCCAGGCGTTTGGAAGCATCAAGGCGTTTGGAAGCATCAAGGCGTATGGAAGTATCCTTTGAAGTGACATCTGAGAGCAGATAA 3615 0.4089 MSDGRKRRRFHLGKIHAFSRGKAVKEEQSLIGGPGFSRKVYINDPERVESNLVNYGDNYVRTTKYTLATFIPKSLFEQFRRVANFYFLVVAILSFLPVSPYSAVSNVVPLVFVVAVSMGKELLEDWKRKTQDIEMNNRKVKVHRGGGVFDVSKWRDLRVGDIVKVEKDEFFPADLILLSSSYEYAVCYVETMNLDGETNLKLKQALEGTSKFQEDSSFGNFKAVIRCEDPNANLYAFVGSLDHEDQQSPLTPQQLLLRDSKLRNTDFIYGVVIFSGHDTKVMQNSTEPPSKRSKIEKRMDKVIYCLFFLLVLISIIGSIFFGISTKDDLENGRMKRWYLRPDDSTIYYDPKNAAIAALLHFLTAVMLYGYFIPISLYVSIEIVKVLQSVFINQDIHMYYVETDQPAHARTSNLNEELGQVETILSDKTGTLTCNSMEFIKCSIAGVAYGRVATEVERALSSRKDSPFGQKFEGGNIVAKSTIKGFNFQDERIMNGNWAREPNANVIQNFLRLLAVCHTAVPEVDEKTGKISYEAESPDEVAFVVAARELGFEFYERTHTTTSVRELNPKSANKTRRSYKLLNILEFSSARKRMSVVVRDEEGKLLLLSKGADNVMFERLAKNGREFEEKTKQHISEYADSGLRTLILAYRELDEEEYNKFNKEFTEAKNLVSADQEHILEEISQNIEKDLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIIISSDTPEIKSLENMEDKSASEKAIKASVLRQIKNGKALISTPDENSDALALIIDGKSLTYALEDDVKDLFLELAVGCASVICCRSSPKQKALVTRLVKIKTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFYEMYASFSGQPAYNDWCMSLYNVFFTSLPVIALGVFDQDVSSKLCHKFPLLYEEGLRNVLFSWKRIIGWAFNGAVSAAIIFFFCIRAMEHQAFRKGGEVVGLEVLGTTMYTCLVWVVNCQMALSISYFTYIQHIFIWGSILFWYIFLMIYGAIDPSFSTTAYEVFIEALAPAPSFWFITLLVVIASVIPYFAYASIQTRFFPVYHQLIQWMRTDGQVNDPELCKMVRQKSIRNTTVGFTARLQASRRLEASRRLEASRRMEVSFEVTSESR 1204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1320 1204 Pfam Cation transport ATPase (P-type) 516 619 - -
Lal7g1320 1204 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 4 1180 - -
Lal7g1320 1204 Gene3D - 537 692 IPR023299 GO:0000166
Lal7g1320 1204 Pfam Phospholipid-translocating P-type ATPase C-terminal 885 1135 IPR032630 -
Lal7g1320 1204 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Lal7g1320 1204 SFLD Haloacid Dehalogenase 406 908 - -
Lal7g1320 1204 Gene3D - 120 286 - -
Lal7g1320 1204 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Lal7g1320 1204 PRINTS P-type cation-transporting ATPase superfamily signature 743 753 - -
Lal7g1320 1204 PRINTS P-type cation-transporting ATPase superfamily signature 857 876 - -
Lal7g1320 1204 Gene3D - 693 897 IPR023214 -
Lal7g1320 1204 SUPERFAMILY Calcium ATPase, transduction domain A 137 284 IPR008250 -
Lal7g1320 1204 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 824 939 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal7g1320 1204 SUPERFAMILY Calcium ATPase, transmembrane domain M 45 1135 IPR023298 -
Lal7g1320 1204 SFLD p-type atpase 406 908 IPR044492 -
Lal7g1320 1204 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 4 1180 - -
Lal7g1320 1204 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 492 694 IPR023299 GO:0000166
Lal7g1320 1204 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 55 1142 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Lal7g1320 1204 Pfam Phospholipid-translocating ATPase N-terminal 40 105 IPR032631 -
Lal7g1320 1204 CDD P-type_ATPase_APLT_Dnf-like 57 1017 - -
Lal7g1320 1204 SUPERFAMILY HAD-like 419 912 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1320 Lal-Chr7 18497675 18503502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1320 10 1180 Primary Pumps ATPases AT1G68710 68.103 0.0 1744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1320 K01530 K14802 gmx:100799312 1989.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal19g1420 19 16910244 16916467 Lal7g1320 7 18497675 18503502 ECH
Lal7g1320 7 18497675 18503502 Lal7g1320 7 18497675 18503502 ECH
Lal7g1320 7 18497675 18503502 Lal19g1420 19 16910244 16916467 LSH