Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1319 ATGACAAAAATTATTAAAGAGATGTTGCCCCCAGATGTACGTGTTGCAAGGGATGCTCAAGATCTACTGATTGAGTGTTGCGTAGAGTTTATTAATCTAGTCTCATCGGAGTCCAATGAAGTCTGTAACAGAGAAGAAAAAAGGACTATTGCACCTGAGCACATATTGAAGGCTTTAGAGGTGCTTGGATTTAGTGAGTACATTGAAGAAGTTTATGCAGCGTACGAACAGCACAAGCTGGAGACCATGCAAGACACTTTAAAAGCGGGTAAGTGGAGCAATGGAGCTGAAATGAGCGAAGAAGAAGCATTAGCAGAGCAGCAAAGGATGTTTGCAGAGGCACGTGCTAGGATGAACGGTGGGGCCGTTGCTCCCAAGCAGCATCCAGAAGGTGACCAAAGTTTAGATAGTTAA 414 0.4396 MTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCNREEKRTIAPEHILKALEVLGFSEYIEEVYAAYEQHKLETMQDTLKAGKWSNGAEMSEEEALAEQQRMFAEARARMNGGAVAPKQHPEGDQSLDS 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1319 137 MobiDBLite consensus disorder prediction 118 137 - -
Lal7g1319 137 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 2 59 IPR003958 -
Lal7g1319 137 SUPERFAMILY Histone-fold 2 123 IPR009072 GO:0046982
Lal7g1319 137 PANTHER PROTEIN DR1 HOMOLOG 1 135 IPR044255 -
Lal7g1319 137 Gene3D Histone, subunit A 1 123 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1319 Lal-Chr7 18487726 18490739 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1319 1 133 CCAAT-DR1 Transcription Factor Family AT5G23090 82.836 2.30e-81 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Lal7g1319 CBFD_NFYB_HMF 3.5e-19 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1319 K21751 - tcc:18604965 248.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1319 7 18487726 18490739 Lal7g1319 7 18487726 18490739 ECH