Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1305 ATGTCATCAAGTGGAACCATTTGGAGCTATGAAGAAGAAAAAACATTTGAAAATGCCATAGCTATGCATTGGACTGAGGAAGAGTCAGAAGAGCAATGGGAGAAGATTGCTTCAGCAGTTCCAAGCAAAAGCATGGAAGAAGTGAAGCAACATTACAAAGCACTAGTGGAGGATGTGAGTGCAATAGAGGCAGGTCATATACCATTTCCAAATTATGCTGCAGAGGAAACTAAGTCTTCAAGTAAGGATTTTCATGGCCCTTCCAAGGCTTCAAGTTCAGATAAGAGATCAAATTGTAATTTTGGAAGTGGGTTTTCTGGGCTAGGACATGACTCTACCTCTAACAGTAATGGTAAAGGAGGACTCTCAAGGTCATCAGAACAAGAAAGGAGAAAAGGAATTCCTTGGACAGAGGAGGAACACAGGTTATTTTTACTTGGTCTAGACAAGTTTGGGAAAGGAGATTGGAGAAGCATTTCAAGGAACTTTGTAATTTCTAGGACTCCCACTCAAGTGGCAAGCCATGCACAGAAGTACTTCATTCGACTGAATTCGATGAATAGGGATCGAAGGAGGTCAAGTATCCATGATATTACAAGCATCAACAATAGAGATGTGGCTAGTAATCAGGCACCAATTACAGGCCAGCATAGCAGCACAATGCCTTCAAGTACAGTGGCTGTAGGACAATCAGTGAAGCATAGAGCTCATCATATGCATGCTGGTTTAGGCATGTATGGAGCACCAGTTGGGCATCCTGTGGCTGCTCATCATGGCCATATGGCATCTGCAGTTGGAACTCCTGTCATGCTTCCTCCTGGACCCCACCACCCCCATCCTCATGCACATCCTCATCCATCTTATGTTGTCCCTCTTGCTTATCCAATGGCACCTCCAACAATGCACCAATAA 912 0.4386 MSSSGTIWSYEEEKTFENAIAMHWTEEESEEQWEKIASAVPSKSMEEVKQHYKALVEDVSAIEAGHIPFPNYAAEETKSSSKDFHGPSKASSSDKRSNCNFGSGFSGLGHDSTSNSNGKGGLSRSSEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITSINNRDVASNQAPITGQHSSTMPSSTVAVGQSVKHRAHHMHAGLGMYGAPVGHPVAAHHGHMASAVGTPVMLPPGPHHPHPHAHPHPSYVVPLAYPMAPPTMHQ 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1305 303 MobiDBLite consensus disorder prediction 76 134 - -
Lal7g1305 303 Gene3D - 134 186 - -
Lal7g1305 303 Gene3D - 1 69 - -
Lal7g1305 303 ProSiteProfiles Myb-like domain profile. 128 180 IPR001005 -
Lal7g1305 303 Pfam Myb-like DNA-binding domain 8 53 IPR001005 -
Lal7g1305 303 Pfam Myb-like DNA-binding domain 135 180 IPR001005 -
Lal7g1305 303 SUPERFAMILY Homeodomain-like 130 185 IPR009057 -
Lal7g1305 303 MobiDBLite consensus disorder prediction 84 123 - -
Lal7g1305 303 SMART sant 132 182 IPR001005 -
Lal7g1305 303 SMART sant 4 58 IPR001005 -
Lal7g1305 303 CDD SANT 8 56 IPR001005 -
Lal7g1305 303 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 132 182 IPR006447 GO:0003677
Lal7g1305 303 ProSiteProfiles SANT domain profile. 136 184 IPR017884 -
Lal7g1305 303 PANTHER TRANSCRIPTION FACTOR KUA1 1 302 - -
Lal7g1305 303 SUPERFAMILY Homeodomain-like 6 61 IPR009057 -
Lal7g1305 303 CDD SANT 135 180 IPR001005 -
Lal7g1305 303 ProSiteProfiles SANT domain profile. 3 60 IPR017884 -
Lal7g1305 303 PANTHER TRANSCRIPTION FACTOR MYBS1 1 302 - -
Lal7g1305 303 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 128 184 IPR017930 -
Lal7g1305 303 ProSiteProfiles Myb-like domain profile. 8 56 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1305 Lal-Chr7 18408546 18410922 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lal7g1305 Myb_DNA-binding 8.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1305 - - vun:114176836 508.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1305 7 18408546 18410922 Lal7g1305 7 18408546 18410922 ECH