Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1300 ATGGTGGCCACTGCTGCTACTGCTTCACTTTTCCCTGTTATTTCACCCCCACCAGACTCTGGCGCAGAAGGCAACAAACATTCTGGTGGCCCCACTAACCTTGGAGGATTCAAATCCAGACACACGTCTTGTCGTGGCTTGAAAGTTAAGGCGAATGCGCAAGCCCCTCCCAAGATTAATGGAGCTGCAGTTGCTACATCTGTAGAAACCTGCAAGGATGATGATGTTTTGCCATCGCCTTCGCCAAGGACTTTTATCAACCAGTTACCTGATTGGAGCATGCTTCTTGCTGCTATCACAACAATTTTCCTGGCAGCTGAAAAACAGTGGATGATGCTTGATTGGAAGCCACGGCGACCTGATATGCTTATTGATCCCTTTGGCATAGGAAAAATTGTTCAGGATGGTATGGTGTTCCGTCAAAACTTTTCTATTAGATCATATGAAATAGGTGCTGATCGAACTGCATCTATAGAGACGGTAATGAACCATTTGCAGGAAAGTGCACTTAATCACGTTAAAACTGCTGGGCTTCTTGGTGATGGCTTTGGTTCTACTCCAGAGATGTTCAAAAAGAACTTGATATGGGTAGTTACACGGATGCAGGTTGCGGTTGATCGTTATCCTACATGGGGTGATGTTGTTCAAGTAGACACTTGGGTTTCTGCATCGGGGAAGAATGGTATGCGTCGCGATTGGCTTTTACGTGACTGCAATACTGGTGAAATATTGACAAGAGCCTCCAGTGTCTGGGTCATGATGAATAAATTGACAAGGAGGCTGTCTAAAATTCCATCAGAAGTCAGAGAGGAGATAGGCTCTTATTTTGTGAATTCTGCCCCAATCATTGAAGAGGATAACAGAAAACTAACTAAACTGGATGACAACACAGCAGATTATATTCGGACTAGCTTAAGTCCTAGATGGAATGATCTGGATGTCAATCAGCATGTTAACAATGTGAAATACATTGGCTGGATTCTCGAGAGTGCTCCACAGTCAATCTTGGAGAGTCATGAGCTGTCTTCCATGACTCTGGAATATAGGAGGGAGTGTGGTAGGGACAGTGTGCTGCAGTCTCTGACTTCCGTATCCGGTGTTGATGTTGGCAATCTAGCTTACAGTGGACACGTTGAGTGCAAACATTTGCTTCGACTTGAGGATGGTGCTGAAATTGTGAGGGGCAGAACTGAGTGGAGGCCGAAACCTGTAAACAACATTGGTATTGTGAATCAGGTTCCATTGAATGATTAG 1254 0.4474 MVATAATASLFPVISPPPDSGAEGNKHSGGPTNLGGFKSRHTSCRGLKVKANAQAPPKINGAAVATSVETCKDDDVLPSPSPRTFINQLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRPDMLIDPFGIGKIVQDGMVFRQNFSIRSYEIGADRTASIETVMNHLQESALNHVKTAGLLGDGFGSTPEMFKKNLIWVVTRMQVAVDRYPTWGDVVQVDTWVSASGKNGMRRDWLLRDCNTGEILTRASSVWVMMNKLTRRLSKIPSEVREEIGSYFVNSAPIIEEDNRKLTKLDDNTADYIRTSLSPRWNDLDVNQHVNNVKYIGWILESAPQSILESHELSSMTLEYRRECGRDSVLQSLTSVSGVDVGNLAYSGHVECKHLLRLEDGAEIVRGRTEWRPKPVNNIGIVNQVPLND 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1300 417 CDD 4HBT 139 255 - -
Lal7g1300 417 Pfam Acyl-ACP thioesterase 136 400 IPR002864 GO:0006633|GO:0016790
Lal7g1300 417 Gene3D Hotdog Thioesterase 129 406 - -
Lal7g1300 417 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 133 285 IPR029069 -
Lal7g1300 417 MobiDBLite consensus disorder prediction 13 37 - -
Lal7g1300 417 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 299 403 IPR029069 -
Lal7g1300 417 Pfam Acyl-ATP thioesterase 1 125 IPR021113 GO:0016790
Lal7g1300 417 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 1 404 IPR045023 GO:0006633|GO:0016297
Lal7g1300 417 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 1 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1300 Lal-Chr7 18364756 18369797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1300 1 402 Acyl Lipid Metabolism Gene Families AT1G08510 78.025 0.0 630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1300 K10781 - gmx:100170693 727.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1300 7 18364756 18369797 Lal7g1300 7 18364756 18369797 ECH
Lal14g1856 14 18112056 18117209 Lal7g1300 7 18364756 18369797 LSH
Lal7g1300 7 18364756 18369797 Lal19g1410 19 16806173 16811215 LSH