Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1299 ATGTTAAAGAAAATTCTTAGAAAATTGCCAAAGAAGGTGACAAAATCTGACTCATCAGATTCTGCAAGGGGGGAGTCTGGAAATACCACCAGTTTTGGAAATGTCTTTCAATGCACAAATGTTGGAAGCACCATTTCTAGCAAATTAAATGTTGTGAAGCGGGTATCTTCGGTTGTTTTCCCTTCAAGCATGAATGCAGGAGTTGAAGCAGTTGACCCTTGTCTATCCTTCAAAGATATTTCGAATACACAAAAGCAAAGTCTGTTTATTAGTAAGTTGAATCTTTGCTGCAAGGTTTATGATATGAGTGATCTTGATAAGAACTGCGCAGAGCAAGATTTTAAGCGTCAAACATTGGTAGACCTTGTTGACTTTGTATCCTCTGGATCTGTAAAATTCACAGAACCAGCAATTGCCGCATTGTGTAAAATGTGTGCAACTAATTTGTTCAGGGTTTTCCCACCTAAGTATCGTACAAGTACAATTGGTGGGGAAACAGATGACGAAGAGCCTATGTTTGATCCTGCCTGGTCTCACCTGCAAGTTGTTTATGATCTACTCCTTCAGTTCATCAATTATAACTCTCTTGATTTGAAGGTGGCAATAAAACATATGGATCATGCTTTTGTTTTAAGATTACTTGACCTTTTTGATTCTGAGGACCCCAGAGAAAGAGATTGCTTGAAAACAATTCTTCATAGAATCTATGGCAAATTCATGGTTCACAGGCCTTTCATACGAAAATCTGTTAGCAATATCATCTACCGTTTTGTTTTCGAGACTGAAAGGCACAATGGCATTGCTGAACTGTTGGAGATTTTCGGGAGTGTGATTAGCGGATTTGCCTTGCCATTGAAGGAAGAGCACATACTGTTTTTGTGCAAGGCTTTAATTCCTTTGCACAAACCTAAATCTGTTGGTATTTATCATCAGCAGCTAACATATTGTGTTGTACAATTCATAGATAAGGATCAAAGACTTGCTAGCTCTGTGTTAAAGGGACTATTAAAGTACTGGCCATTAACGAATAGTCAAAAAGAGCTTATGTTCATAAGTGAGTTGGAAGAGGTTTTGGAAATGACTAGCATGGCTGAATTTCAGAAGATTATGGTCCCACTGTTTCGACGAATAAGTTGTTGCCTTAATAGTTCTCATTACCAGGTGGCAGAAAGAGCTCATTTGCTGTGGAACAATGAGCACATCCTTAATCTTATCACGCAAAACCGGCATGTGATTCTGCCACTTGTGTTCTCAGCACTTGTAAATAACACCAAAAATCACTGGAATCAAGCAGTGCTGAACCTGACTCAGAACGTAAGGAAGACACTTTCACAAATGGATGAGGATCTGGTACTCACATGCCAACGCAAATTCGAGGAGGAAGATTCAGGGGCAGGTGCTGCAGCTGAGAGAAGAAGAATAACATGGGAACGCGTAGAAGCCGATGCAAAAAGTGTCCAACCTGTAGTTGGTGCTGATGTTATAGTTCCAGTAAGATCACCTGCTACATGCTCTGTGGCTTGTTAG 1527 0.3995 MLKKILRKLPKKVTKSDSSDSARGESGNTTSFGNVFQCTNVGSTISSKLNVVKRVSSVVFPSSMNAGVEAVDPCLSFKDISNTQKQSLFISKLNLCCKVYDMSDLDKNCAEQDFKRQTLVDLVDFVSSGSVKFTEPAIAALCKMCATNLFRVFPPKYRTSTIGGETDDEEPMFDPAWSHLQVVYDLLLQFINYNSLDLKVAIKHMDHAFVLRLLDLFDSEDPRERDCLKTILHRIYGKFMVHRPFIRKSVSNIIYRFVFETERHNGIAELLEIFGSVISGFALPLKEEHILFLCKALIPLHKPKSVGIYHQQLTYCVVQFIDKDQRLASSVLKGLLKYWPLTNSQKELMFISELEEVLEMTSMAEFQKIMVPLFRRISCCLNSSHYQVAERAHLLWNNEHILNLITQNRHVILPLVFSALVNNTKNHWNQAVLNLTQNVRKTLSQMDEDLVLTCQRKFEEEDSGAGAAAERRRITWERVEADAKSVQPVVGADVIVPVRSPATCSVAC 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1299 508 PIRSF PP2A_B56 5 505 IPR002554 GO:0000159|GO:0007165|GO:0019888
Lal7g1299 508 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 76 483 IPR002554 GO:0000159|GO:0007165|GO:0019888
Lal7g1299 508 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 506 IPR002554 GO:0000159|GO:0007165|GO:0019888
Lal7g1299 508 MobiDBLite consensus disorder prediction 1 27 - -
Lal7g1299 508 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 506 - -
Lal7g1299 508 SUPERFAMILY ARM repeat 86 461 IPR016024 -
Lal7g1299 508 Gene3D - 82 481 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1299 Lal-Chr7 18358717 18362260 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1299 K11584 - gmx:100814349 880.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1299 7 18358717 18362260 Lal7g1299 7 18358717 18362260 ECH
Lal7g1299 7 18358717 18362260 Lal19g1409 19 16800560 16804349 LSH