Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1296 ATGTCTATCACTAACTGGGAAGCTGATAAAATGTACGGACACTGGTTAGATGTGTATATCTACAATTATCTTATGAAGAGGCAACTTCACACATCTGCAAGTGTATTTCAGGCCGAAGCAAATGTTCCAACCGAATCTGTTGCTATAGACGCACCAAATAGTTTTCTCTTTGAGTGGTGGTCAGTCTTTTGGGACTTATTCATTGCTAGGACTGATCAGAAGCACTCAGAAGCAGCAGCATTTTACATTAAGAGCCAACAAATTAAAGCTCAAGAAATGCAGAAGCAACAAGAGCATCAGAGCCCAATTCCAATCCAGAATCAACAAATGCAAATACAGCTCTTACTGCAGAGGCATGCTCAGCAGCATCAGCAATGCAGTGATGGAACTCCACTTGTTAGTGGCAGTACTAGCAGCCCTATTAGCAATGATCCTTTGATGAGGCTGAATCGTGCAGCTTCTAATGCTATGGCAACAAAAATGTATGAGGACAGATTGAAACCTCCACTCCAGAGAGATGTTTTAAGTGATGCAACCATCAAGCATAGGGTAGGTGGTAATGTTGGTCAGCATCTGGATACAAATCATGCCTCATTGCTGAAAGCAGTAGAAGCAACAACTAGCGGGCAGGCTACAAGGCAAACATTGCTTGCTGCACTTAGCATTTTACAGGGGAATCTCCAAGTTCAAAATCCAAATCCGCTACTTCCAGGGTCTACACAGTCTTGTGTCCTGAAACAGGACATAACGAGTGATACAAGTGCAATGATGAGGTCTCAAGCTGTTGTTTCAGAAGGGTCATATATTGGTGGTCATGGTTCAAATCAAGGTGGTAGCAATTTGACTCTGAAAGGATGGCCTTTGGCGGGATTGGATCAGCTTCGCTCTGGACTTTTCCACCAGAATAATTTGATGCAGTCTCCACAAGCTTTCAATCAACTTTCACGACAGCAGCAACTTATGCTTCAGGCACAGCAGAATTCGTTTCCCCCACCTGTCAGTGATTTTGAGAGCAGGAGGCTCAGAGCTCTTCTTAATCAAAATATTGGTATTGGGAAAGATGGCCGATCAAATTCTCTAGGTGATTTAATTCCTAATGTTGGAACACCTTTACAAGCTGGTTCTCCTATATTGCCTCATCTAGACTCAGATATGTTCCTTATGCAACAAGATCAAAAGATTAATCAGCAGCTTCAACAGTTTTCACAACAAACTCTTTCAAGGCAACACTTTCAGAGGCTCCAGCGCCTCGAAAAAGTTGGTTCTGGCAACATAATAGATGGCTTCATGTCCAGTACTTTACAAGGAAATGAGCAGGTTTTCACTCTGCTACCTGCTTCCAAACATGTTGGCCGGAAGCGAAAGCAAACAACTTCTTCAGGTCCTGCCAATAGCTCTGGAACTGCAAACACCACAGGACCTTCTGCCAGCTCACCTTCAACACCGTCTACGCAAACACCAGGAGATGTGATGGCCATGCCAACTCTGCAACAGAATGTTCCTTCTTCTAAGTCACCACTTATGTATATTACTGATGGTTTGGGCTCACATGCATCAGCACAAAATCAATTGGATGATATGGAACGCCTCATGGGTGAGGGATCTTTGAGTGACAATGTTGAGTCTTTCTTATCTCCTGATGATGCAGACCCTAGAGATAGAGTTGGCGAAGGATTCTCATTCAAGGAGATCAAACATATAATGGCAAGTACACATAAAGTTGAGTGTTGTCATTTCTCATCAGATGGAAAACTGTTTGCTACTGGTGGCCAAGATAAAAAGGCTAAGTTGTGGTACACAGAATCATTTAACATGAAATCTACACTTGAAGAACACAATCAATCGATAACTGATGTTCGGTTTAGTCCAAGCACGTTGCATGTTGGCACATCCTCTGCTGATAAAACTGTCAGGGTTTGGGATGTTGATAACCCTGGTTATTCTCTTAGAACATTCACAGGGCATGCAACAACTGTTATGTCACTAGACTTTCACCCAAGTAAACAAGACCTTATTTGCTCATGTGATAATAGCGAGATAAGATACTGGAGTATAAAAAATGGTAGTACTGCTGGGGTTTTCAAGGGTGGTGTAACTCAGATGAGATTTCAACCTGGTTTGGGAAGGCTTCTAGCTGCAGCAGTAGATAACCTGATATCCATTCTTGATGTGGAAACCCTGGGTTGCATACTTAAATTACAGGGACATGACAACAATGTCCGAAGTGTGTGCTGGGAATCTTCTGGAAAACATTTGGCATCACTTAGTGATGATCTAGTTAAGGTGTGGACAGTTGGATCTGGTAGCAAAGGGGAATGCATTCATGAGCTGAATGCTACTTCTGCCAACAAATTCATTACATGTGTTTTCCATCCCTTCTATCCTTTGTTGGTCATTGGTTGCCATGAGACACTTTTGCTGTGGAACTTTGGTGAGAACAAGACAATGTCTCTACATGCACATGACAAGGTTGTGTCTGCATTGGCAGTATCAAATGTTAATGGGCTGGTGGCTTCAGCTAGCCATGACAAGCATTTCAAGATCTGGAAGTGA 2553 0.4269 MSITNWEADKMYGHWLDVYIYNYLMKRQLHTSASVFQAEANVPTESVAIDAPNSFLFEWWSVFWDLFIARTDQKHSEAAAFYIKSQQIKAQEMQKQQEHQSPIPIQNQQMQIQLLLQRHAQQHQQCSDGTPLVSGSTSSPISNDPLMRLNRAASNAMATKMYEDRLKPPLQRDVLSDATIKHRVGGNVGQHLDTNHASLLKAVEATTSGQATRQTLLAALSILQGNLQVQNPNPLLPGSTQSCVLKQDITSDTSAMMRSQAVVSEGSYIGGHGSNQGGSNLTLKGWPLAGLDQLRSGLFHQNNLMQSPQAFNQLSRQQQLMLQAQQNSFPPPVSDFESRRLRALLNQNIGIGKDGRSNSLGDLIPNVGTPLQAGSPILPHLDSDMFLMQQDQKINQQLQQFSQQTLSRQHFQRLQRLEKVGSGNIIDGFMSSTLQGNEQVFTLLPASKHVGRKRKQTTSSGPANSSGTANTTGPSASSPSTPSTQTPGDVMAMPTLQQNVPSSKSPLMYITDGLGSHASAQNQLDDMERLMGEGSLSDNVESFLSPDDADPRDRVGEGFSFKEIKHIMASTHKVECCHFSSDGKLFATGGQDKKAKLWYTESFNMKSTLEEHNQSITDVRFSPSTLHVGTSSADKTVRVWDVDNPGYSLRTFTGHATTVMSLDFHPSKQDLICSCDNSEIRYWSIKNGSTAGVFKGGVTQMRFQPGLGRLLAAAVDNLISILDVETLGCILKLQGHDNNVRSVCWESSGKHLASLSDDLVKVWTVGSGSKGECIHELNATSANKFITCVFHPFYPLLVIGCHETLLLWNFGENKTMSLHAHDKVVSALAVSNVNGLVASASHDKHFKIWK 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1296 850 Gene3D - 555 682 IPR015943 GO:0005515
Lal7g1296 850 ProSiteProfiles Trp-Asp (WD) repeats profile. 652 693 IPR001680 GO:0005515
Lal7g1296 850 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 652 689 - -
Lal7g1296 850 ProSiteProfiles LIS1 homology (LisH) motif profile. 16 44 IPR006594 GO:0005515
Lal7g1296 850 SUPERFAMILY WD40 repeat-like 560 850 IPR036322 GO:0005515
Lal7g1296 850 MobiDBLite consensus disorder prediction 456 491 - -
Lal7g1296 850 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 818 850 - -
Lal7g1296 850 ProSiteProfiles Trp-Asp (WD) repeats profile. 818 850 IPR001680 GO:0005515
Lal7g1296 850 Pfam LisH 16 40 IPR006594 GO:0005515
Lal7g1296 850 Pfam WD domain, G-beta repeat 570 598 IPR001680 GO:0005515
Lal7g1296 850 Pfam WD domain, G-beta repeat 648 684 IPR001680 GO:0005515
Lal7g1296 850 Pfam WD domain, G-beta repeat 814 850 IPR001680 GO:0005515
Lal7g1296 850 Pfam WD domain, G-beta repeat 607 641 IPR001680 GO:0005515
Lal7g1296 850 Pfam WD domain, G-beta repeat 729 763 IPR001680 GO:0005515
Lal7g1296 850 ProSiteProfiles Trp-Asp (WD) repeats profile. 609 644 IPR001680 GO:0005515
Lal7g1296 850 PANTHER LISH-SSDP-WD40 4 850 - -
Lal7g1296 850 SMART WD40_4 602 641 IPR001680 GO:0005515
Lal7g1296 850 SMART WD40_4 770 809 IPR001680 GO:0005515
Lal7g1296 850 SMART WD40_4 645 684 IPR001680 GO:0005515
Lal7g1296 850 SMART WD40_4 560 599 IPR001680 GO:0005515
Lal7g1296 850 SMART WD40_4 811 850 IPR001680 GO:0005515
Lal7g1296 850 SMART WD40_4 726 764 IPR001680 GO:0005515
Lal7g1296 850 SMART WD40_4 687 723 IPR001680 GO:0005515
Lal7g1296 850 ProSiteProfiles Trp-Asp (WD) repeats profile. 567 608 IPR001680 GO:0005515
Lal7g1296 850 MobiDBLite consensus disorder prediction 448 491 - -
Lal7g1296 850 ProSitePatterns Trp-Asp (WD) repeats signature. 628 642 IPR019775 -
Lal7g1296 850 MobiDBLite consensus disorder prediction 126 145 - -
Lal7g1296 850 Gene3D - 683 850 IPR015943 GO:0005515
Lal7g1296 850 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 609 644 - -
Lal7g1296 850 CDD WD40 563 850 - -
Lal7g1296 850 PANTHER TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8 4 850 IPR044716 GO:0003714
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1296 Lal-Chr7 18330176 18337459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1296 563 824 Miscellaneous Gene Families AT5G08390 23.443 1.84e-17 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR LUG Lal7g1296 WD40 0.0099 CL0186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1296 - - gmx:100801265 1064.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1296 7 18330176 18337459 Lal7g1296 7 18330176 18337459 ECH