Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal7g1293 ATGGCATCGTCACCATCCAAACTAAGCCTTGATAGCACAACCCATATGGCACTCAAATCATTTGGGAGTCAGAATAGTGATCAAAGCTACAAGGTTGAAGAGATCATTTCCCAACTTGAGGAAGAACGTCTCAAGATTGATGCCTTCAAGCGCGAACTTCCTCTCTGCATGCAACTTCTCACTAACGCTATGGAGGCTTCAAGGCAGCAACTTGAGGTGTTCAAAGTGAATAATCAAGGGACAAGGCCAGTTCTGGAAGAGTTTATACCAATAAAGCACTCTACCTATAAAAGCTGCTCTTCTGAAAAGGAAACAAACATAACTGATAACAAGGCAGATTGGATGACTTCTGCTCAATTATGGAGCCAGGCAAGCGAAGGAACCAAACAACAACCCAATACAATTATCACATCATTCCCTAAAGAAGCAGCTGAAAATATTGGTTTCAGCATGAGCCCTAGTCTTGTTCTAAACCACAATAACAAACAGGGGAATCATAATGGTGGAGGAGGAGCTTTCCTTCCATTCTCAAAAGAAAGAAATTCCTCTCAAATTTCTGCATTGAGGGCTCTCCCTGAATTGGCTCTGGCCTCTGCCGATAAAGAAATTGTGGATAAGAAATGTGAAGAGCCATGTCTCAAGATGGAGAATTCAAGCAACGGTGGCACTAATGGAATGGTAGTTGGAAAAGGGCCATCTCATGCACAAAACACAACAACGGCTGCTACTACTCAAACTCATAGGAAAGCAAGAAGGTGTTGGTCACCCGAATTGCACCGTCGATTTGTTAATGCTCTTCAAATGCTTGGTGGTTCTCAAGTGGCCACTCCAAAACAGATTAGGGAGTTGATGAAGGTTGATGGTTTGACTAATGATGAAGTTAAAAGCCATCTCCAGAAATATAGGCTTCACACCAGAAGACCCAGTCCAAGTCCACAAACAGGTGCACCAGCAACACAGCTTGTGGTCCTAGGAGGAATTTGGGTCCCACCAGAATACGCTACGGCGGGGGCTCCTACCCTCTATGGCGCGCACCCTAACTCACTACCTCAGGAGTTCTATACCGCGGCGCCACCACAGCAGCTACTTCCACAGCCTCCTCCTCCGCACCAAAGTGCCCTCCACCACCACCACCAACTCATGCACGTGTACAAGACGGCCCCACAGAAGCAAAGGTTGCCGGAATATGATGTTCAAGGAGGATCGGAGAGTATAGAAGATGGGAAATCGGAGAGTAGCAGCTGGAAAGGGGAGAGTGGTGAGAATGAAGGAGAAAGGAAAGGGTTGCAGTATGACGAGATTAATGGGAGTGACATCACTCTCAAATTCTAG 1332 0.4617 MASSPSKLSLDSTTHMALKSFGSQNSDQSYKVEEIISQLEEERLKIDAFKRELPLCMQLLTNAMEASRQQLEVFKVNNQGTRPVLEEFIPIKHSTYKSCSSEKETNITDNKADWMTSAQLWSQASEGTKQQPNTIITSFPKEAAENIGFSMSPSLVLNHNNKQGNHNGGGGAFLPFSKERNSSQISALRALPELALASADKEIVDKKCEEPCLKMENSSNGGTNGMVVGKGPSHAQNTTTAATTQTHRKARRCWSPELHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPSPQTGAPATQLVVLGGIWVPPEYATAGAPTLYGAHPNSLPQEFYTAAPPQQLLPQPPPPHQSALHHHHQLMHVYKTAPQKQRLPEYDVQGGSESIEDGKSESSSWKGESGENEGERKGLQYDEINGSDITLKF 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal7g1293 443 MobiDBLite consensus disorder prediction 409 432 - -
Lal7g1293 443 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 249 304 IPR006447 GO:0003677
Lal7g1293 443 MobiDBLite consensus disorder prediction 358 377 - -
Lal7g1293 443 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 246 306 IPR017930 -
Lal7g1293 443 Gene3D - 248 306 - -
Lal7g1293 443 Coils Coil 32 52 - -
Lal7g1293 443 MobiDBLite consensus disorder prediction 232 249 - -
Lal7g1293 443 Pfam Myb-like DNA-binding domain 251 302 IPR001005 -
Lal7g1293 443 SUPERFAMILY Homeodomain-like 246 307 IPR009057 -
Lal7g1293 443 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 3 443 IPR044787 GO:0003700|GO:0006355
Lal7g1293 443 MobiDBLite consensus disorder prediction 232 251 - -
Lal7g1293 443 MobiDBLite consensus disorder prediction 394 443 - -
Lal7g1293 443 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 3 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal7g1293 Lal-Chr7 18309377 18311988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal7g1293 1 443 G2-like Transcription Factor Family AT2G03500 46.541 5.39e-111 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lal7g1293 Myb_DNA-binding 2.6e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal7g1293 - - gmx:100807925 507.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal7g1293 7 18309377 18311988 Lal7g1293 7 18309377 18311988 ECH
Lal7g1293 7 18309377 18311988 Lal19g1406 19 16773038 16775652 LSH